Detailed information of ANN30511-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:9253281...9266199
NR annotation: CAH3162746.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NUT7Sortilin OS=Danio rerio OX=7955 GN=sort1 PE=2 SV=1
Q6PHU5Sortilin OS=Mus musculus OX=10090 GN=Sort1 PE=1 SV=1
O54861Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000041 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15902
all species →
Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF15901
all species →
Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031778
all species →
DomainSortilin, N-terminalInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR031777
all species →
DomainSortilin, C-terminalInterproscan
IPR006581
all species →
DomainVPS10Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301
all species →
REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN30511-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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