Gene detail

Detailed information of ANN30520-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:9685618...9700650
NR annotation: CAH3164809.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN30520-RA

ATGGGATTTATCCGTGTAAAGTTGATAGAAGTCGAACCGGCGGCCGGGTGGTCGAAAGACACTCAGCCGTTCGATCCTTATTGTGCTGTTCACATAAAAGAAGCGGTGATGTCTGCGAATCATGGGATTTCTTTGGTACAGAAGAAAAAGACGATTTATCCAGAATGGAATAAGTGCTTTGATACACATCTTTACGAGGGCCGCGTAATAACAATCGTGGTTTTACAAAAATCGAACGGAAAAGTTGTAGCAGATGTATCAATTGGCGTGCAGTTCTTGGTTGATCAATGCAAACGAGATGCACACGGATTTTCCAGCGTTTGGCTGGATCTTCAACCCACTGGTAGACTACTAGTACAAGTTAGACATTTTACTGAAGTAATAGATGACCCCACAAAAGAAGGCAAACCCCATGAGAATCACAGTGGTCTCACTGGCCGACGGGGTGCCATGCGAAAACAGAAATGTCACATCATAAGGGGACACAGATTTGTTGCCAGGTTCTTCCGACAACCTGTGTTTTGTTCCGTCTGTACAGAATTCATGTGGGGATTTGGAAAACAAGGATATCAGTGCACAGTTTGTACAATGGTTTGTCACAAAAGATGCCATGAAATAATCCTTAGCAATTGCCCTGGAACACAGAATGTGGCTGAGGAGACTAAGAAAATGAAAGAAAGATTCAAGATTGACATGCCACACAAATTCAAGGAAACAACCTTCTTTAGTCCGACGTTCTGTGATCACTGTGGATCTATGCTCTATGGACTGTACAAACAAGGCTTAAAATGCCAAGACTGCAATATGAATTGCCACAAAAAGTGTAAAGCTGTTGTCCCTAACCTGTGTGGAGTAAATCAAAAGCTGTTAGCGGAGGCCATGGCAAATGCTAAGGATGATATCAGGAAGCGTAAAATTAGCGAAGATCAGAAACCCGGTAAGGCAGGAAAAGGCAAATCCTCTCCAACGAGTAAAACAGACGAGGACAGCGACGATGATGATGATGATGTTGGAGTTTATGAGGCATTATGGGATGCCATTTCTCCTCCGCTTCCTCAACGGACCAGTAGCATTCAAGGAAAAGACGTCCGGAAGCTTCAACAACGGCTCTATCACATTGATGATTTTACTTTACTGAAAGTGCTGGGCAAGGGCAGTTTTGGCAAGGTTCTTCTCTGTGAGCTGAAGGAAACGAAGAAGGCTTTTGCTATCAAAGCACTCAAGAAAGATGTTGTTTTGGAAGACGACGATGTAGAGTGTACAATGGTGGAGCGAAGAGTCCTGGCTTTAGCCACAAGACATCCTTTCTTAACTCATCTACATTCAGCATTCCAGTCTCAGGATCATTTGTTTTTTGTGATGGAGTACCTTGGAGGGGGTGACTTGATGTTCCACATACAAACAGTTGGGAAGTTTGACGAGCCACGATCCAGGTTCTATGCAGCTGAGATTGTTTGTGGGTTGGAGTTCTTACACGGCCGAGGAATTATTTACAGAGATTTAAAGCTCGACAACGTTCTGCTGGATTCAGAAGGCCACATTAAACTGGCAGACTTTGGCATGTGCAAGGAAGGAATCCTAGAGACTAAGAAGGCGACCACATTCTGTGGAACACCGGATTACATTGCACCTGAGATTCTGAAGGGATGGAGATATGACGCGTCCGCTGATTGGTGGTCTTTTGGTGTTCTTGTTTACGAGATGCTGATTGGCCAGTCTCCGTTTGCGGGTGAAGACGAAGAGGACTTGTTTGATTCCATCTGCCGTGACAAAGTTCATTATCCAAAGTGGATATCAAGCAATGCTGAAGACTGTTTGTCCCAGTTGTTTGAAAGATCACCAGTGGAAAGGCTTGGTTACAAAGGCGGTTCAAACCCTAACATCCGGGACCACAAGTTTTTTGAGCGCATTGATTGGACGAAGCTTGAGCAGAGAAGGGTAAACCCGCCATTCAAACCGTTAGTGAAATCTGATCATGACACCAATAACTTTGATCCGGATTTCACCATGGACGTACCGCAGTTCACGCCAACAGACAAGGACTTGCTTCAATCCATGGACCAGGGACAGTTCCGAGGATTCTCATTTGTGAATCCGTACTTTGGAACCCAACATTGA

Transcript

ANN30520-RA

Protein

Uniprot

Uniprot term	Description
P09215	Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1
P28867	Protein kinase C delta type OS=Mus musculus OX=10090 GN=Prkcd PE=1 SV=3
Q05655	Protein kinase C delta type OS=Homo sapiens OX=9606 GN=PRKCD PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00433	Pkinase_C	Protein kinase C terminal domain	Family	Interproscan
PF21494	PKC_C2	Protein kinase C delta/epsilon/eta/theta, C2 domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR017892	Domain	Protein kinase, C-terminal	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000008	Domain	C2 domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR050236	Family	Serine/threonine-protein kinases, AGC	Interproscan
IPR000961	Domain	AGC-kinase, C-terminal	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR020454	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR014376	Family	Protein kinase C, delta/epsilon/eta/theta types	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24356	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0004697	Molecular Function	diacylglycerol-dependent serine/threonine kinase activity	Interproscan