Gene detail

Detailed information of ANN30529-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:9843528...9860457
NR annotation: XP_029209105.2, target of rapamycin complex 2 subunit MAPKAP1-like isoform X1 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IIM3	Target of rapamycin complex 2 subunit MAPKAP1 OS=Xenopus tropicalis OX=8364 GN=mapkap1 PE=2 SV=1
Q7ZYH1	Target of rapamycin complex 2 subunit MAPKAP1 OS=Xenopus laevis OX=8355 GN=mapkap1 PE=2 SV=1
Q9W6S3	Target of rapamycin complex 2 subunit MAPKAP1 OS=Gallus gallus OX=9031 GN=MAPKAP1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004637 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16978 all species →	CRIM	SAPK-interacting protein 1 (Sin1), middle CRIM domain	Family	Interproscan
PF16979 all species →	SIN1_PH	SAPK-interacting protein 1 (Sin1), Pleckstrin-homology	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031567 all species →	Domain	Sin1, middle CRIM domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR031313 all species →	Domain	SAPK-interacting protein 1, Pleckstrin-homology domain	Interproscan
IPR008828 all species →	Family	TORC2 component Sin1/Avo1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13335 all species →	TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005546 all species →	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0031932 all species →	Cellular Component	TORC2 complex	Interproscan
GO:0038203 all species →	Biological Process	TORC2 signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20410	MAPKAP1, SIN1, AVO1; target of rapamycin complex 2 subunit MAPKAP1/AVO1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.