Detailed information of ANN30614-RA in Montipora grisea

Genomic Location: Scaffold_6361__1_contigs__length_27196:18134...19842
NR annotation: KAG1707588.1, Porphobilinogen deaminase [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q48AW8Porphobilinogen deaminase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) OX=167879 GN=hemC PE=3 SV=1
Q88B91Porphobilinogen deaminase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=hemC PE=3 SV=1
Q8E9H0Porphobilinogen deaminase OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=hemC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan
PF04397LytTRLytTr DNA-binding domainDomainInterproscan
PF00072Response_regResponse regulator receiver domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan
IPR007492DomainLytTR DNA-binding domainInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan

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