Gene detail

Detailed information of ANN30625-RA in Montipora grisea

Genomic Location: Scaffold_4466__1_contigs__length_32171:8474...11277
NR annotation: KAG0162850.1, hypothetical protein DFQ30_001176 [Apophysomyces sp. BC1015]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN30625-RA

ATGATCGTCGAGGTGCGGATCCCCACGCTGGCCGAGTCGGTCCCCGATGCGAAGCTGCTCGCGTGGAAGTTCGCGCCCGGAGACCGGGTGGCGCGGGGAGACGTCCTCATCGAGCTCGAGACGGACAAGGTCGTGCTGGAGGTGCCCGCTCCCGAAGCCGGGGTCCTCGCCGAGATCGTGCTTGCCGAGGGAGAGACGGCCGAGAGCGAGCAGTTGCTCGCGCGCATCGACACCGGCGCCGTGGACGATGCGCCGGCCAGGCGAGCGCGCGCCGTCGCGGAGGAAGCCGCGCCGGCAGCGGAGGCCGCGGCGAGCACGAAGGAGGCGGTCGCGATGGGTCCGGCGGTGCGCCGCCTCGTCGCCGAGCACCGCATCGACCCCGGCTCCGTCTCCGGGTCCGGGAAGGGCGGGCGTCTTACCAAGGCGGACGTGCACCGTCACCTCGAGGAGGTGGCGCCGACGGCCGATGCGACACGACCGGCGGACGGCAGGGCGCCGGCGCCAGCCTCCCGGGACCGAAGCGAACCCGAAGCGCGCGGGGAGCCCGTCGCGCATTCCGGGCCCACCAGGCACGGCGCCGAGTGCACGACCACCGCCGGAGGGCCCGCTCCGCCCTCCTCCGCCCCGGCGTCCGGCGAATGCGCGGGGCCGCGCGGGGAACGGCGCGAGCCGATGTCGCGGCTTCGCCGCCGGGTCGCGGAACGGTTGCTCGAGGCGCAGCGCTCCGCCGCGATCCTCACCACCTTCAACGAAGTCGACATGCAGCCGGTGACGGAGCTGCGCCGCCGGTACCGCGACGACTTCGAGCGCCGCCACGGGGCGCGTCTCGGCTTCATGTCCTTCTTCGTCAAGGCGGCGGTGCAGGCACTCCAGCGCTTTCCGCTCGTCAACGCGTTCATCGACGGCGACGACATCGTCCACCACGACCACTGCGACATCGGGGTTGCGGTCGGCTCCCCGCGCGGTCTCGTCGTCCCGGTGCTTCGAAACGCGGAGAGCCTTTCGTTCGCGGCGATCGAAGGCGCCATCGCCGATTTCGGCGCGCGCGCCCGTGACGGCGCCCTTGGCCTCGAGGAGCTGACCGGCGGGACGTTCACGATCTCGAACGGCGGCGTGTTCGGCTCCCTGCTCTCCACCCCGATCCTGAATCCGCCCCAGAGCGCCATTCTCGGCATGCACAAGACCCAGCCGCGACCGGTCGTGGACGAGAACGGCGCCATGGTGGTCCGACCGATGATGTACGTCGCGCTCTCCTACGACCACCGCATCATCGACGGTCGCGAGGCCGTGCGGTTCCTCGTCGCGATCAAGGAGGCCGTCGAGGACCCGGCGCGCCTTCTGCTCGAAACCGCTTCGTCCGGTGGGGATGTGTACGACGTGGTCGTCGTCGGCGCCGGTCCGGGCGGCTACGTCGCCGCGATCCGATGCGCCCAGCTCGGCCTCGCGGCGGCGTGCGTGGACAAGTGGACCGCCGTGGACGGGAAGCCGGCCCTCGGCGGGACCTGCCTCAACGTCGGGTGCATCCCGTCCAAGGCGTTGCTCGACTCCTCGCACCGTTTCCACGACCTTTCGCATCGGTTCGCCGAGCACGGGATCGTGGTGGAAAGCGCCCGGATCGACGTTGCCGCGATGCAGGCCCGCAAGGACGAGGTGGTCGCGTCCCTCCGGCGAGGGGTGGCGGCCCTCCTGCGCAAGAACGGGATTGCGGTCGTGGCCGGAGCCGCCCGGATCGGCGCGGATGGCGACGTCATCGTCGACGGCGTTGACGGTGACCCGCCACGGTCGTTGCGCACCGACAACATCATCCTCGCCACCGGATCCGTTCCCGCCCCCCTTGCGGTCGCGCCGGTGGACGGGGAACACATCGTCGATTCCGAGGGCGCGCTCGCATTCGAGGAGGCGCCCGGACGACTCGGGATCATCGGCGCCGGCGTGATCGGCCTCGAGCTCGGGAGCGTGTGGAACCGACTCGGCTCCGATGTCGTGCTGCTCGAAGTGCTGGACGACTTCCTCGCCGCCGCCGACCGTGACATCGCGCGCGCCGCGCTCCGGACCTTCCGGCGCCAGGGTCTCGACATCCGACTCGGGAAGCGGGTGCTCGGATGCGACGCCGGGGACGCCGTGACGGTCCATTACGAGGACGCGGACGGCCCGCAGCGACTCGAGGTAGACCGCCTCGTGGTCGCGACCGGGCGGCAGCCACGCACCCGCGCGCTCGGGCTCGAGGAAGCCGGGATCGAGCGCGACGAGCGGGGCTTCGTACGGGTCGATGCGACGGGACGCACGACCCGGAACGGAGTGTGGGCGATCGGGGACTGCGCGCCCGGCCCGATGCTCGCGCATCGGGCGTCGGAGGACGGGGTCGCGGTCGCGGAGCGGATCGCCGGCCAGGCGAGCGTGCTCGACCACCGCACCGTGCCCTGGGTCATCTACACGCACCCCGAGATCGCGTGGGTCGGCCGGACCGAGGCCGAGCTCGGCACGGCGGGCGTCGAATGGCGCGCCGGGCGATTCCCGTTCGCGGCTTCCGGTCGAGCCCTTGCCGCGGGAGACACGGAAGGCTTCGCGAAGATCGTGGCGGACGCCGAGACGGACGAAGTCCTCGGCGTGCACCTCCTCGGCCCGCAAGCCTCGGAGCTCGTCGCCGAGGCGGTCACCGCAATGGAGTTCAGCGCGAGCGCCGAGGACCTCGCCCGCACCATCCACGCCCACCCGACGCTTTCCGAAGCCCTCCGCGAGGCCGCCCTCGCGCTCGACGAACGCGGGATCCACGCCTGA

Transcript

ANN30625-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14218	Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens OX=294 GN=lpd PE=1 SV=3
Q9I3D1	Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=lpdG PE=1 SV=1
P31052	Dihydrolipoyl dehydrogenase OS=Pseudomonas putida OX=303 GN=lpdG PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002934 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00198 all species →	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF02817 all species →	E3_binding	e3 binding domain	Family	Interproscan
PF02852 all species →	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF00364 all species →	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050151 all species →	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan
IPR001078 all species →	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan
IPR016156 all species →	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023213 all species →	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR036625 all species →	Homologous_superfamily	E3-binding domain superfamily	Interproscan
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR004167 all species →	Domain	Peripheral subunit-binding domain	Interproscan
IPR006258 all species →	Family	Dihydrolipoamide dehydrogenase	Interproscan
IPR003016 all species →	Binding_site	2-oxo acid dehydrogenase, lipoyl-binding site	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR004099 all species →	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR006255 all species →	Family	Dihydrolipoamide succinyltransferase	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR012999 all species →	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912 all species →	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004148 all species →	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0004149 all species →	Molecular Function	dihydrolipoyllysine-residue succinyltransferase activity	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0045252 all species →	Cellular Component	oxoglutarate dehydrogenase complex	Interproscan
GO:0016668 all species →	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN30625-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.