Gene detail

Detailed information of ANN30635-RA in Montipora grisea

Genomic Location: Scaffold_177__1_contigs__length_165853:833...3697
NR annotation: WP_089372840.1, acyl-CoA dehydrogenase [Dokdonia pacifica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN30635-RA

ATGGATTTTAGTTTAACCGAAGAACATTTATTAATACGTGATGCAGCGCGTGATTTTGCTAGAACAGAATTACTACCTGGTGTTATAGAACGTGATGAAAAACAACAGTTTCCTGATGAGCTAGTAAAGAAAATGGGAGAGTTAGGTTTTCTAGGTATCATGGTAGATCCAAAATATGGAGGAAGTGGTATGGATGCTATTTCATATGTACTTATTATGGAAGAATTATCTAAGGTAGATGCTTCTGCTTCTGTAATTGTATCTGTAAACAATTCTTTAGTATGCTACGGACTTGAAGCCTATGGAAGCGAAGCTCAAAAAGAAAAATACCTTACCAAACTAGCTACTGGTGAGTATGTAGGTGCTTTTTGTTTAAGTGAACCTGAAGCAGGTTCTGATGCAACTTCTCAAGCAACTACAGCAGAAGATAAAGGTGATCACTATGTACTTAATGGTACCAAAAACTGGATTACAAATGGAGGTCGTTCTGACGTATATTTAGTTATTGCTCAAACAGACAGATCAAAAGGACATAGAGGAATCAATGCTTTTATCGTAGAAAAAGGAATGCCAGGTTTTGAAATAGGGCCTAAAGAAGATAAATTAGGAATTAGAGGAAGTGATACACATACACTACAATTTAATGATGTAAAAGTTCCTAAAGAAAATCGTATTGGAGAAGATGGGTTTGGATTCAAATTTGCAATGAAAACACTTTCTGGTGGACGTATTGGTATTGCTTCTCAAGCTTTAGGTATTGCTTCTGGAGCATACGAACTAGCTCTTAAATATTCTAAAGAGCGTAAAGCTTTTGGAACTGAAATTTGCAATCACCAAGCGATTGCTTTCAAACTTGCCGATATGTATACAGAAATTGAAGCGGCTCGCCATTTAGTAATGAAAGCTGCCTGGGATAAAGATCAAGGAAATAATTACGATCGTACAGGTGCTATGGCAAAACTATATGCTTCAAAAGTAGCAATGGAACAAACTGTAGAAGCTGTACAAATACACGGAGGTAATGGTTTTGTAAAAGAATATCACGTAGAGCGTTTAATGCGTGACGCAAAAATCACTCAGATTTACGAAGGAACTACAGAGATTCAAAAAATTGTAATTTCCAGAATTTCTTGTAAAAAAGAAAACACTCCGAAAGTAGCAACCACTATAGAATCATTAGAAAAAAAGAATCATCCTTCTCAAGATGTACACTTTTTTGTAACATCAGAAGATAAAAAAGCACTTGAATTCATAAACCTTCTCGACTTTTCCGAATTGGCTGGACGGCCTGATATTCATTATGAAACTATTATGAGAGGTAACACTCTAGAAATAACACTACATAATGTTTCTAAACCTCAGATTATAGAAATTATGGCTTTTGGAGATCCTCATTTTTACAATACCAGAGCATTTATACAACCTCAGGATTTGCTTTATTTTCGTTTAGAAGACGGAGCTATTACCTTTTTCAATTCCGATAGTCCTGAAAATAATTTTTTCTCTAAAATCACTTCTCCTGAAATGCAATGGCCCAATTTTAATGGAGATATTAAAGCTTATAAAGAAGATGTGATGGCAATGCGAGATAAACGCAAAAAACTTTTTGAAGATTTTACCGAAGAACATCCGGAAGTATCAGAAACATTCAAAACGCATGTCGCAGATGAAATGCATTATGAATATCTATATCAATTGGTAAATCCAAGATCTATAAAACCCACTGCAGAGGCAGCAGTACTCAATAACTTCAATAATGGAGAAGGACTCCTCGCAACATTGCGATCATCCAGATATAATTCTGAAAAAGACATGCTTAATTTTAGCACGTATTACGATGAAGTTTCAATAGTCGATTTTCAAAAACCTGAGTATGTCAACAACGATTATTTTAAACGTACACTCACAGGTATGATACGTCATTACTTTGCCGAATATGATTACCTCAACTACTCCAAAGAAACATTTTTAGCAGAAAAAAAGTTTATTGACGAAAATCTGGATGGAGATCTCAAAACCTATGCATTAGGAAGATTGATCTATGATTATAGCGAAAAAGGATTTGGTCGTGGAGCTCAAGACATAGCGATACTAAAGAATGCTATTTCAGAGCTTAAATCTATGACAACCGATCCCTCTTATTTAGAAACTATGTATACGATAGAGACCAGCATTGACATTATACAATCTGGTATTCCTGATCATATTCTCGAAGAAAAACTCCTCACTACAACATTAGACACTATTACAGTTGGAGAAGTATTACAAAACACAAAAGGCAGTATACGCACATTAGATTTTTGGGCGAGTTGGTGCGGACCTTGCATTAAGGAGATGCAAACCACTAAAACCTTTAAAGATAATCTTGCTTCTCAATATAATACCGATTGGATTTACATATCTGCCGATGAGGTTCAGGAAAAGTGGATCAAGAAAACAAAACAGCTTCAGGAATATATTCCCGAAGAGAAACATTATCGATTTGCACGACCATTTAAATCAAAATTATTGAAGCTTTTAAAAGCTCGTAAAAATAATAAAGTGTATGTGCCTCGTTATACGATTTTAGATACAGATAATAGTGTTGCTATTGCTATTGCTCCTTATCCTTCAGATAGTATTACATTTAAAAAGAGTATTGAGGAAATCGCAACCAGGAAATAA

Transcript

ANN30635-RA

Protein

Uniprot

Uniprot term	Description
P45867	Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) OX=224308 GN=acdA PE=2 SV=1
P52042	Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W) OX=272562 GN=bcd PE=1 SV=1
P45857	Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) OX=224308 GN=mmgC PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13905	Thioredoxin_8	Thioredoxin-like	Domain	Interproscan
PF02771	Acyl-CoA_dh_N	Acyl-CoA dehydrogenase, N-terminal domain	Domain	Interproscan
PF02770	Acyl-CoA_dh_M	Acyl-CoA dehydrogenase, middle domain	Domain	Interproscan
PF00441	Acyl-CoA_dh_1	Acyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006089	Conserved_site	Acyl-CoA dehydrogenase, conserved site	Interproscan
IPR013766	Domain	Thioredoxin domain	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR037069	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	Interproscan
IPR046373	Homologous_superfamily	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	Interproscan
IPR036250	Homologous_superfamily	Acyl-CoA dehydrogenase-like, C-terminal	Interproscan
IPR009100	Homologous_superfamily	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	Interproscan
IPR012336	Domain	Thioredoxin-like fold	Interproscan
IPR013786	Domain	Acyl-CoA dehydrogenase/oxidase, N-terminal	Interproscan
IPR006091	Domain	Acyl-CoA oxidase/dehydrogenase, middle domain	Interproscan
IPR009075	Domain	Acyl-CoA dehydrogenase/oxidase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43884	ACYL-COA DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003995	Molecular Function	acyl-CoA dehydrogenase activity	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02337	dnaE; DNA polymerase III subunit alpha	EC:2.7.7.7	DNA repair and recombination proteins	ko03400	deepkoala