Gene detail

Detailed information of ANN30713-RA in Montipora grisea

Genomic Location: Scaffold_4280__1_contigs__length_32814:13820...15907
NR annotation: WP_237381827.1, tetratricopeptide repeat protein [Sulfidibacter corallicola]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN30713-RA

ATGAGCTTTCGGTCAAATGATGCGAATCCTCCAAAGCCGCCTTCTGATTCCAGTCTGAAATTTTCACGGGGCGATTCTCCGGACAAGCCCGTGCAGCCGGACGGTCTTTTGAGCAACCGGATGGAACTGGAGTCCGGCGCTTGGTTTGGACCGTTCCGGATCGAAAAGAAGATCGGTCAGGGCGGCATGGGCAACGTCTATCTCGCCACACGCGGCGATGAGCTGGACCTGAAGGTAGCCCTCAAGACGCTTACTTCCTGGCAACCGGACATGCTGACCCGTTTCCAAAAGGAATGTAAAATCCTCTCCGGTCTCAAACACCCCCATATCGCCCATCTCATCGATGCCGGGGTACAGTCTTCCGGCCAGCCCTGGCTGGCCATGGAATACGTGGAGGGCCAAAACCTCCGAGACTACCTGAAGACGCACGACCCGGGTCTGAAAGACCGGCTCCGTCTCTTCCTCAAAATCTGTGACGCCTTGAGCCATGCCCATCAGCAGATGGTGATCCATCGGGACTTGAAACCTGCCAACATCATGGTCCAGGCCAACGGGGAGCCCAAGCTGCTGGATTTCGGGATCGCCGCGATCCTGGATCCGGAAACCGGCGAACAACTCACGGTCACCGCCCTTTCCGATCAGATGATGACGCCGGAGTACGCCTCGCCCGAACAGATCAACGGCCTTCGGCTGAATGCGGCCTCGGATGTGTACAGCTTGGGTGTGTTGTTCTACGAGCTCTTGACGGGTACCCGGCCCTATACCTTCAGCAGGCGAAATATCGCGGAGATCATCCGCACGGTCAACGAGGCACCCATCACCAGGCCGAGCGGTGTTCGCGGAGAGGACGGTGCGGCCACGGGAACATTCACGCGCCAACTGCGGGGTGACCTGGATACCATCGCCTTGAAGGCGTTGGAACGGGACCCGGAGCGCCGCTATGCCAGCATGGAAGCCTTCGCCTCCGATATACGCTTGTATTTACGCGGCCTGCCCATCGAGGCCCGCCCGGCAACCCGGGTATACCGGTTGCGCAAATTTGCGGCACGCCATCCCTGGCCGGTGGCCATGGGGCTGGGCCTCCTGGTTTTCCTGCTGGCCTTTTCCATCTATGCCGCCTATCAGGGAGCACGCATCACCCGGGAACGCGATCTTGCCCGAAGAGAACAACAAACGGCGGAGCGGATCACGGGGTTCCTGGTCTCCATGTTCGAGCAGGTGGACCCGGATTTGGCCCGGGGCGGTGAAGTGAGCGCCTTCGAGGTGATGGAGAACGGCCGGCGTCAGATAGATGTGAGCCTGGCCGAGGAGCCGGAGGTCCAGACCCGGCTGATGACCACCATGGGCAGGGTCTACCGTGCCCTGGGTCATCACAACCCATCCCGGGAGCTGCTGGAACGGGCCGTTGCCAACCAGGATCCCACCAAGGCGGACGCCTATCTTACCGAGCTGGAGCTGATCCGCACCCTGCAGGCCGCCGGTGACTACCCGGCCGCGCAAAAACGCCTGGAGACCCTATCCGAAAACCTGCCGGCCGACGCCGATCCCCTTAAAAGGGCCCGGCTGGAACATGCCCGCGGCCGGCAGTGGTTCCTGCGGGGCAACTATGCGCGTGCCACCGCCGCCTATGACGCGGCTGTCGCCCATTTGAGCGAGATCCCGGCGGCCGAGCAACTGGCGCTTCGCCGGGACCGGGCCGAGCTGCAATCGCAACTGGGCTTTCACGACATAGCTATCGAAGAATTACGGAATCTCTTGTCACGGCAGCGGGCGCGCCACGGGGAGACCCATTCCGAGGTGGCTCGAACGCTCGCGGCCCTGGGGCATCAATATGAACTGAAGGAAAATTACGAGGAAGCGTCGCGTTTGAACGACCAGGCCGAACAGATCTACCGCGGCATATTCGGTGACCGGCACCCTCACCTCATCGGCTGCCTCACGCGACGCGGCCGGCTGCTCCGGAAAAAAGGGGACTACCCCGCCGCCGAACCCCTTTTCCACAGGCTCTGGACACGGCCCGCGAGCTACTGGGCGAGACCCATCCCGTCGTGGCCGCCAATCTCTCCGAGCTCGCGCACCTGTTACTGA

Transcript

ANN30713-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0A5S5	Serine/threonine-protein kinase PknB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=pknB PE=3 SV=1
A5TY84	Serine/threonine-protein kinase PknB OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) OX=419947 GN=pknB PE=1 SV=1
P9WI80	Serine/threonine-protein kinase PknB OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pknB PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0016734 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43289 all species →	MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12132	prkC, stkP; eukaryotic-like serine/threonine-protein kinase	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.