Detailed information of ANN30750-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:14458631...14462445
NR annotation: XP_029199746.2, histone deacetylase 6-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z2V5Protein deacetylase HDAC6 OS=Mus musculus OX=10090 GN=Hdac6 PE=1 SV=3
A0A8I6GM68Protein deacetylase HDAC6 OS=Rattus norvegicus OX=10116 GN=Hdac6 PE=3 SV=1
Q54QE6NAD-dependent deacetylase sir2A OS=Dictyostelium discoideum OX=44689 GN=sir2A PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010167 (this species only)
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02148
all species →		zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001607
all species →		DomainZinc finger, UBP-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47665
all species →		HISTONE DEACETYLASE-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN30750-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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