Gene detail

Detailed information of ANN30758-RA in Montipora grisea

Genomic Location: Scaffold_634__1_contigs__length_82192:6820...9387
NR annotation: MBI3303330.1, nucleotide sugar dehydrogenase [Deltaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN30758-RA

ATGAAAGTTGGTATGTCGGTTTTTATGCAGAATACGGGCGAGCGGTGGTCTGACTACGAAGTCTACAAGAATGACCTTCGTCTGGCGGACCAGGCTGAAGACCTGGGCTTTGACTCCCTATGGAGTGTTGAGCACCATTTTACGCCCTATACCATGGTCCCAAATGTCACCCAGTTCTTGACGTATATGGCCGGGCGAACGCAAAAGATCGAGCTGGGAACAATGGTGATTGTCTTACCCTGGCATGATCCTGTGCGCGTTGCAGAAGAAATTGCCATGCTTGACCTCTTGTCCGATGGCCGCATCACTATTGGCTTTGGCCGCGGGGCGGCAACGGTGGAGTATGATGGCTTCCGCATTCCCATGGAAGAATCTCGCGATCGTTTTGTTGAAGCCGCCGAGGTTGTCGTCAAGGCGCTATCTCAGGAGCGGTTCTCGCACCAGGGCAAGTTTTTTCAAATTCCCGAGACGAGCATCCGACCGCGACCCTTTTCCCGCCCGGAACATCGCCTCTATGGGGCGGCCGTCAGCCCGGATACGGCCGAGCGGATGGCCAAGTTAGGCTTAGGCGTATTGGTTGCCGTGCCGCTGCACGGCTGGGATGCGGTGGCGAAAGACGTCCAGAGGCATGACGAGATTATTCGGGCGGCGGGTAAAGAGCCTGTCCGGCCCATTGTGGCCAGTTTCGTCCATGTTGGGGAGACCGAGAAGGAAGCACGCGAAGGGGCAATGCAGTATATGGGTGGCTATTGGGGCTCGGCTGACGCTCACTACCATTTCTCAGACGGACACCTCAAGCAGGTCAAGGGCTATGAGCACTATGGGGTGATTGCCGATAATGCGAAGACGACAACCCCGGAACAAGGAGTGCAGGATTTTGTCAATCTCCAAGTGGCTGGAACCCCGGAGCAGTGCATCGCTCAAATTCAGGTCATGCAAAAAAAAGTTGGCTTCGATCATCTGATTGCGGTCTTCAGCTATGGGGGGATGCCTCCTGAGCAGACCGAGCGGAATATGCGGCTGTTTGCATCTGAAGTCATGCCCGTGCTTCAAAGCCAGGGATCTCCTGTTACCGTTGGTGGAGGAGCTGTGGGATTCGCCAAGGATATTCTGTGTATTGGGGCGGGCTATGTTGGTGGACCAACCATGGCCATGATTGCCGCCCGCTGCCCCCAGTACAAGGTAACCGTTGTTGATATCAACCATGCTCGCATTGCAGCCTGGCAGAGCGCTCACCTGCCGATCTATGAGCCCGGTCTCGACGAGGTGGTGAGGCAGGCGCGGGGTCGCAATCTTTTTTTTTCGACCCAGGTCGAGCAGGGCATTCGTGACGCCGATATTATCTTTGTCTCGGTTAATACCCCCACAAAAAGCTTTGGTCAGGGCGCCGGGCGCGCAGCGGATTTGCAGTACTGGGAGAAAACCGCGCGCCAGATTCTTGAACACGCTGATCGGAAAAAGATTGTAGTGGAAAAGTCGACGCTGCCGGTCCGGACCGCCGAGGCAATGGAGCGCATCCTCAACGCCAATACGAAGAATATCCGTTTTGAGGTGCTCTCCAACCCGGAATTTCTGGCTGAGGGCAGCGCCATCGCCGACCTGGAAACTCCCGACCGCGTCCTCATTGGATCGAAAGAAACGCCCGGGGGGATCGCAGCCAGACAAGCCCTTGTCGAGATTTACGCCAACTGGGTACCGAGAGAGAATATTATTGAGTCGAACGTCTGGAGTTCCGAGTTGTCGAAGCTGGCGGCGAACGCGTTCTTAGCCCAGCGCATTTCTTCCATCAATACGATCTCCGCCTTGTGTGAAAAAACAGAGGCTGACGTGGATGAAGTCGCCTACGCGATTGGAAAAGACTCGCGGATCGGACCAAAGTTCTTGAAGGCGAGCATCGGTTTTGGTGGATCGTGTTTTAAAAAGGACATTCTCAACCTCGTTTACATCTGTCACAGCTACGGTCTCAGCGAAGTGGCCGAGTACTGGGAGTCGGTCGTCACAATCAACGAGTGGCAGGAGAGCCGCTTTGTGCGGACCATCCTCGAAAGCATGTTCAATACGGTGGCCGGAAAACGCATCGCCCTGCTGGGCTTTGCCTTTAAGGCCAACACCGGAGACACGCGGGAATCTCCGGCTATTCATATTGCGCGTGGGCTTGCCGAAGAATGGGCCGAGGTCGTGGTGACCGACCCGCAGGCGCTCGCCAATGCGCAGGATGATCTGGTGGATATGGGAGACCGAGTGCGCTTTGAATCCGACCCCTATATAGCGGCAGAGGGAGCGCACGCCCTAGCGATTCTGACCGAGTGGGATGTGTATCGCCAGCTCGATTACGCCCGCATTCTTGCGTCTATGGAGCAACCGGCCTTCCTCTTCGACGGACGCAACATCCTGGACCACCAACGGCTGTTTGAGCTGGGGTTCAACGTCTTTCCAATCGGAAAGGCCGCGCTCAAACAGTTCTGA

Transcript

ANN30758-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2QS13	UDP-glucose 6-dehydrogenase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=UGD5 PE=2 SV=1
B7F958	UDP-glucose 6-dehydrogenase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=UGD2 PE=2 SV=1
Q2QS14	UDP-glucose 6-dehydrogenase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=UGD4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004194 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03721 all species →	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF00296 all species →	Bac_luciferase	Luciferase-like monooxygenase	Domain	Interproscan
PF00984 all species →	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan
PF03720 all species →	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028356 all species →	Family	UDP-glucose 6-dehydrogenase, eukaryotic type	Interproscan
IPR001732 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036661 all species →	Homologous_superfamily	Luciferase-like domain superfamily	Interproscan
IPR017476 all species →	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR014027 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR011251 all species →	Domain	Luciferase-like domain	Interproscan
IPR036220 all species →	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR014026 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11374 all species →	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003979 all species →	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN30758-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.