Detailed information of ANN30819-RA in Montipora grisea

Genomic Location: Scaffold_822__1_contigs__length_71934:59445...60059
NR annotation: NCF34959.1, DNA topoisomerase I [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q87AQ6DNA topoisomerase 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=topA PE=3 SV=1
Q9PEV8DNA topoisomerase 1 OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=topA PE=3 SV=1
Q1RIM1DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=topA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01131
all species →		Topoisom_bacDNA topoisomeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013826
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 3Interproscan
IPR013497
all species →		DomainDNA topoisomerase, type IA, centralInterproscan
IPR003602
all species →		DomainDNA topoisomerase, type IA, DNA-binding domainInterproscan
IPR000380
all species →		FamilyDNA topoisomerase, type IAInterproscan
IPR023405
all species →		Homologous_superfamilyDNA topoisomerase, type IA, core domainInterproscan
IPR013825
all species →		Homologous_superfamilyDNA topoisomerase, type IA, central region, subdomain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42785
all species →		DNA TOPOISOMERASE, TYPE IA, COREInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003916
all species →		Molecular FunctionDNA topoisomerase activityInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0003917
all species →		Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN30819-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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