Genomic Location: Scaffold_2949__1_contigs__length_39048:5074...7701
NR annotation: MBR9909415.1, alanine--tRNA ligase [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families
| CDS |
| ANN30823-RA |
| Transcript |
| ANN30823-RA |
| Protein |
| ANN30823-RA |
| UniProt accession | Description |
|---|---|
| Q21L68 | Alanine--tRNA ligase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=alaS PE=3 SV=1 |
| Q9I553 | Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=alaS PE=3 SV=1 |
| A4XWE2 | Alanine--tRNA ligase OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=alaS PE=3 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002669 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07973 all species → | tRNA_SAD | Threonyl and Alanyl tRNA synthetase second additional domain | Domain | Interproscan |
| PF02272 all species → | DHHA1 | DHHA1 domain | Family | Interproscan |
| PF01411 all species → | tRNA-synt_2c | tRNA synthetases class II (A) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050058 all species → | Family | Alanine--tRNA ligase | Interproscan |
| IPR045864 all species → | Homologous_superfamily | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Interproscan |
| IPR012947 all species → | Domain | Threonyl/alanyl tRNA synthetase, SAD | Interproscan |
| IPR018162 all species → | Homologous_superfamily | Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily | Interproscan |
| IPR002318 all species → | Family | Alanine-tRNA ligase, class IIc | Interproscan |
| IPR003156 all species → | Domain | DHHA1 domain | Interproscan |
| IPR018165 all species → | Domain | Alanyl-tRNA synthetase, class IIc, core domain | Interproscan |
| IPR018163 all species → | Homologous_superfamily | Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily | Interproscan |
| IPR023033 all species → | Family | Alanine-tRNA ligase, eukaryota/bacteria | Interproscan |
| IPR018164 all species → | Domain | Alanyl-tRNA synthetase, class IIc, N-terminal | Interproscan |
| IPR009000 all species → | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11777 all species → | ALANYL-TRNA SYNTHETASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0002161 all species → | Molecular Function | aminoacyl-tRNA editing activity | Interproscan |
| GO:0004813 all species → | Molecular Function | alanine-tRNA ligase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006419 all species → | Biological Process | alanyl-tRNA aminoacylation | Interproscan |
| GO:0045892 all species → | Biological Process | negative regulation of DNA-templated transcription | Interproscan |
| GO:0004812 all species → | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0043039 all species → | Biological Process | tRNA aminoacylation | Interproscan |
| GO:0000166 all species → | Molecular Function | nucleotide binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01872 | AARS, alaS; alanyl-tRNA synthetase | EC:6.1.1.7 | Transfer RNA biogenesis | ko03016 | deepkoala |
