Detailed information of ANN30962-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:18254527...18321549
NR annotation: XP_029186459.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114954128 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q2PZL6Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR016201DomainPSI domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000998DomainMAM domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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