Detailed information of ANN30966-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:18375386...18411935
NR annotation: CAH3046881.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B8V7Q1Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q9Y5E8Protocadherin beta-15 OS=Homo sapiens OX=9606 GN=PCDHB15 PE=1 SV=1
Q5DRD3Protocadherin beta-15 OS=Pan troglodytes OX=9598 GN=PCDHB15 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07974EGF_2EGF-like domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06825FBN1; fibrillin 1-Glycosaminoglycan binding proteinsko00536deepkoala

TOP