Gene detail

Detailed information of ANN31013-RA in Montipora grisea

Genomic Location: Scaffold_1694__1_contigs__length_51116:31598...34384
NR annotation: KAG1716510.1, hypothetical protein ID866_648 [Astraeus odoratus]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN31013-RA

ATGCCCAGAATGCCTTTCAAGCTAACTCTCGTTAAATTAATTCCATTGGTGTTACGCTTTACTGCCGTTAACATTGACACTCCATACTCTCTTAAAATCAATTCCTTACCTATCGAATCGTCAGTTAATCTCGTTTACCTATATACGGGCCCAACCGTGAGCGAAAATAAAACCTCTTTAAGTTACAAAGATGCAGGCGTAGATATCGATGCAGGTAATCAACTTGTTGAACGCATTAAATCTGTTACCAAGAAAACCCATAGACCAGAAGTAAAAGGTAATCTGGGTGGTTTTGGTGCACTTTGTGAACTGCCTACTAAATATAAAAAGCCGCTACTTGTTTCAGGTACTGACGGCGTGGGTACAAAACTGAGAGTTGCTATGGATGCTAACCGTCATGACGGTGTTGGTATCGACTTAGTAGCAATGTGCGTAAACGACCTTATTGTTCAAGGTGCTGAGCCCCTATTCTTTCTAGATTACTACGCAACTGGCAAGCTTGACGTTGATGTAGCCGCGTCGGTTGTTACCGGCATTGGCGCCGGCTGTGAGCAAGCAGGTTGTGCATTAATTGGTGGTGAAACAGCCGAAATGCCTGGAATGTATCACGATGGCGACTACGATATTGCAGGCTTCTGCGTCGGCGTGGTTGAAGCTGATAAGGTTATTGACAGCACTAACGTTAAACCAGGTCAAAAACTAATTGCACTTGGTTCATCGGGCCCTCACTCAAACGGTTACTCATTAGTTAGGAAGATCATTGAAGTTAGTGGTGCAGATGTAAACGCCGACCTAAACGGCAAGCCTATCATCGACCAACTTCTTGAGCCTACTCGCATCTATGTTAAATCAGTATTGGCATTGCTTGAAGAAGTGCAAGTAAGCGCTATTTCTCACATCACGGGCGGTGGTTTTTGGGAGAACATCCCTCGCGTGCTACCTGAAGATGCGAAAGTGGTTATTGACGAAAGCACCTGGGAATGGCCTGCAATCTTCTCTTGGTTACAAGAAAACGGTAACGTGACTCGCCACGAAATGTACCGCACGTTTAACTGTGGTGTTGGCCTTGTAATCGTTGTTGACGAAAGCGATACCGATGCTGCGCTGAACATTCTTAAACAACACGGTGAAAATGCTTGGGTTATTGGTGATATCGCAGCAAAAGATGGCGAAGAGCAAGTAGAGATCAACGCCAATTTACAAGCCATTATCGATGAAATAAAAGCAGGTCGTCTGAACGCGGAAATCAGCGGCGTGATCAGTAATCGCCCTACTGCTTATGGTCTGGAACGCGCTAAAGAAGCCGGGATCAATGCGGTTTGCTTAGATCATACAGGCTTCGATTCACGAGAGTCTTATGACGGGGCGCTCAAAGCACAAATTGAGGCTTTTGGCGCAGACTGTGTTGTTCTTGCGGGCTTTATGCGTATCTTAACACCGGAGTTCGTCGACAGCTTTGCTGGAAAATTAGTGAACATTCATCCATCTTTGTTGCCGAAGTACAAAGGTTTGAATACGCATCAGCGAGCTATCGACAATGGAGACAAGGAGCACGGCGTTAGCGTGCATTTTGTTACACCGGAGCTCGACGGCGGCCCTGTTATCATTCAAAGCCGCGTACCTGTGTTTGAAGACGACACAGCAAGCGACCTGGCCGAGCGTGTTCAAGAACAAGAACGTCGTATCTATCCGCTTGTACTATCTTGGTTTAGTGCAGGCCGATTATCGATGCGAAACAATAAGGCAGTTTTAGATGAGCAAGAATTACCAGAATCTGGCGCACTGTTAGCAGCATCGCTTTCAGTGGCCGCGCAAGCAAACCCTAGTACAGAAAATACGGATAGTGCAGAGCTACCGCTTCAGCCCTACAAGGCAACCTATACCGCATACAAATGGGGTGACGACGTAGGCGAAGCGAATATTGAGCTCTCGAAATTAGGTGACCAACAGTATTCTCTAATTTACACGTCAAAAGTGTCTAAGTTTTTCTTGTCTGACAAACGCAGTGAACATTCTATTTTTACTGTTAATGATAATACCGTCGTACCTTCTGAGTACTACTATAATCGTTCTGGCACAGGACCTGATAAAGAGCTTAAGGTAACATTTAGTCATCAGGGACAAGGCAAAATTGCAGTCGAGAATGGCGAAACATTTGATTGGAACGGTGAATTTGATAACCAAATTTATCGTATTGACCTTGCAAAACAGTTAGCGGAAGGTAAGACATCGCTAGAATACCACTTCGTGAATTATCGTGGCGAACTTCGTCACTACGGCGTTCAAGTGGTGGATGAAGAGGTATTGTCTTTACCTTTCGGTAAAATTGAAACTGTAAAAGTTAAGCTTATTCGCGACTCAAATAAGCGTGAGACGTTTGCCTGGTTTGCGCCATCACTTAACTACACGTTAGTTCGTCTGCAACAGTTCAAAGAAGGCGATGAACAGGGCGATATCAAACTGAAATCGTTTGAGACGCAGTAA

Transcript

ANN31013-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4RZX7	Phosphoribosylformylglycinamidine cyclo-ligase OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=purM PE=3 SV=1
Q15SY3	Phosphoribosylformylglycinamidine cyclo-ligase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=purM PE=3 SV=1
Q5E3H3	Phosphoribosylformylglycinamidine cyclo-ligase OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=purM PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002833 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11306 all species →	DUF3108	Protein of unknown function (DUF3108)	Family	Interproscan
PF00586 all species →	AIRS	AIR synthase related protein, N-terminal domain	Domain	Interproscan
PF00551 all species →	Formyl_trans_N	Formyl transferase	Domain	Interproscan
PF02769 all species →	AIRS_C	AIR synthase related protein, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036921 all species →	Homologous_superfamily	PurM-like, N-terminal domain superfamily	Interproscan
IPR004733 all species →	Family	Phosphoribosylformylglycinamidine cyclo-ligase	Interproscan
IPR021457 all species →	Family	Protein of unknown function DUF3108	Interproscan
IPR004607 all species →	Family	Phosphoribosylglycinamide formyltransferase	Interproscan
IPR016188 all species →	Domain	PurM-like, N-terminal domain	Interproscan
IPR036676 all species →	Homologous_superfamily	PurM-like, C-terminal domain superfamily	Interproscan
IPR036477 all species →	Homologous_superfamily	Formyl transferase, N-terminal domain superfamily	Interproscan
IPR002376 all species →	Domain	Formyl transferase, N-terminal	Interproscan
IPR010918 all species →	Domain	PurM-like, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10520 all species →	TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004641 all species →	Molecular Function	phosphoribosylformylglycinamidine cyclo-ligase activity	Interproscan
GO:0006189 all species →	Biological Process	'de novo' IMP biosynthetic process	Interproscan
GO:0004637 all species →	Molecular Function	phosphoribosylamine-glycine ligase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0046084 all species →	Biological Process	adenine biosynthetic process	Interproscan
GO:0004644 all species →	Molecular Function	phosphoribosylglycinamide formyltransferase activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN31013-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.