Detailed information of ANN31026-RA in Montipora grisea

Genomic Location: Scaffold_270__1_contigs__length_127288:31528...32910
NR annotation: MBY8977618.1, pyruvate dehydrogenase complex E1 component subunit beta [Coraliihabitans acroporae]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R9N4Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti (strain 1021) OX=266834 GN=pdhB PE=3 SV=2
O66113Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=pdhB PE=3 SV=2
Q4UKQ7Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=pdhB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004162 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02779
all species →		Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF00364
all species →		Biotin_lipoylBiotin-requiring enzymeDomainInterproscan
PF02780
all species →		Transketolase_CTransketolase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005475
all species →		DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR011053
all species →		Homologous_superfamilySingle hybrid motifInterproscan
IPR000089
all species →		DomainBiotin/lipoyl attachmentInterproscan
IPR009014
all species →		Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan
IPR003016
all species →		Binding_site2-oxo acid dehydrogenase, lipoyl-binding siteInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR027110
all species →		FamilyPyruvate dehydrogenase E1 component subunit betaInterproscan
IPR033248
all species →		DomainTransketolase, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11624
all species →		DEHYDROGENASE RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004739
all species →		Molecular Functionpyruvate dehydrogenase (acetyl-transferring) activityInterproscan
GO:0006086
all species →		Biological Processacetyl-CoA biosynthetic process from pyruvateInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00162PDHB, pdhB; pyruvate dehydrogenase E1 component subunit betaEC:1.2.4.1
Diabetic cardiomyopathyko05415deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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