Gene detail

Detailed information of ANN31086-RA in Montipora grisea

Genomic Location: Scaffold_1980__1_contigs__length_47269:8101...8768
NR annotation: WP_168534238.1, MULTISPECIES: ATP-dependent RNA helicase DbpA [Alteromonas]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q887N8	ATP-dependent RNA helicase RhlB OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=rhlB PE=3 SV=1
P25888	ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3
Q88NB7	ATP-dependent RNA helicase RhlB OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=rhlB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR050079	Family	DEAD box RNA helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan