Detailed information of ANN31088-RA in Montipora grisea

Genomic Location: Scaffold_171__1_contigs__length_171572:901...1906
NR annotation: WP_089370893.1, peptide deformylase [Dokdonia pacifica]
Species abbreviation MGRIS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0M3P3Peptide deformylase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=def PE=3 SV=1
A5FGV5Peptide deformylase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=def PE=3 SV=1
A6H0E7Peptide deformylase OS=Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) OX=402612 GN=def PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006126 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01327
all species →		Pep_deformylasePolypeptide deformylaseDomainInterproscan
PF03652
all species →		RuvXHolliday junction resolvaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023635
all species →		FamilyPeptide deformylaseInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036821
all species →		Homologous_superfamilyPeptide deformylase superfamilyInterproscan
IPR005227
all species →		FamilyPutative pre-16S rRNA nucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10458
all species →		PEPTIDE DEFORMYLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042586
all species →		Molecular Functionpeptide deformylase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0018206
all species →		Biological Processpeptidyl-methionine modificationInterproscan
GO:0006364
all species →		Biological ProcessrRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN31088-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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