Detailed information of ANN31149-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:21698982...21728402
NR annotation: CAH3141577.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NU07G-patch domain and KOW motifs-containing protein OS=Xenopus laevis OX=8355 GN=gpkow PE=2 SV=1
Q90X38G-patch domain and KOW motifs-containing protein OS=Danio rerio OX=7955 GN=gpkow PE=2 SV=2
Q5B4R9Pre-mRNA-splicing factor spp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=spp2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006241 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12656
all species →
G-patch_2G-patch domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000467
all species →
DomainG-patch domainInterproscan
IPR045166
all species →
FamilyPre-mRNA-splicing factor Spp2-likeInterproscan
IPR008991
all species →
Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR026822
all species →
DomainSpp2/MOS2, G-patch domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15818
all species →
G PATCH AND KOW-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0000398
all species →
Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681
all species →
Cellular Componentspliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN31149-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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