Gene detail

Detailed information of ANN31161-RA in Montipora grisea

Genomic Location: Scaffold_2244__1_contigs__length_44486:35960...39077
NR annotation: MCP4660157.1, DUF4981 domain-containing protein [bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN31161-RA

ATGCCCTTTGCCGCCCGAGCCGCGGCTCTCAAAGGAAATAGAAAGGCCTCGACCTGGTACCGGACGCTCGACGGCCCGTGGAAGTTCCATTGGGTCCGCCGCCCCGACCGGCGGCCGGCTGATTTCTACAAGCCCGATTACGATGCGAGCGGCTGGGATGAGATACCCGTTCCGAGCTGCTGGGAGATCCAGGGTTACGGGAACCCGATCTATCTGGACGAGGCCTATCCCTTTCCCGCGGATCCGCCGCGGATCCCGCACGACTACAACCCGGTCGGTTCCTATCGCCGCATCTTTACCATACCTGACCACTGGCGGGACAAGCTGGTGTTTCTGCACTTCGGCGGGGTGGAATCAGCCATGTACGTGTGGGTCAACGGTCATCGTGTCGGCTACAGCCAGGGCAGCAGGACACCCGCGGAATTCGACATCACGCCCTATTTGCGCGCGGGCGACAACTTGCTGGCCGTGGAGGTCTACCGTTGGAGTGACGGCTCCTATCTGGAATGCCAGGATTTTTGGCGGATCTCCGGAATCAAACGCGAGGTCTTCCTCTATGCCGCACCCAAGCTTCGGATCCGTGATTTCGAGCCTCCGCACCACCGTGCGCAATCACCTTCCCCGGGAGGCGGACGGTTTCAGCCTTCGGGTAGAGCTCTTCGGACCCGACGGTCCCGCGATCCGGGATTTGACCGTCCGGCCCGAGAACGGGTTGCCGGCCGGTTCGGAAACCGTGCTCGCTTGTCAAAGCCGAATCGAAAAGGTTCGCCCCTGGACCGCGGAAACACCCCATCTCTACACCCTGTTGCTCACGTTGCGGGACCGGGAGGGGAAAACCCTCATGACCACATCCCGGCGGATCGGTTTCCGTACGGTCGAAATTCGGGACGGCTTGTTGCGGGTCAATGGAACGGCGATCACCTTGCGAGGCGTCAACCGCCACGAGCACGAGCCGATAAAGGTCAGGTCGTAACCGAGGAAAGCATGATGCGGGATATCGAGCTGATAAAGCAGTTCAATATCAATGCGGTCCGGACCGCCCATTATCCCAACGTTCCCCGGTGGTATGAGCTGTGCGACCGGTACGGGCTCTACGTGGTGGACGAGGCCAATATCGAATCCCACGGCATGGGCTACGATCCCGACAAGACGCTGGGCAACCGGCCCGCCTGGAAACAGGCCCATTTGGACCGCACCATCCGCATGTTCGAACGAGACAAAAACCATCCCTCCGTCATCATCTGGTCCCTCGGCAACGAGGCCGGTGACGGCGTAAACTTCCAGGCTACCTATTCCTGGCTCAAAAAGCGCGATCCCTCGCGTCCCGTCCAATACGAACAGGCGGGGAAAAACCCCATACGGATATCGTGGTGCCCATGTACGCCAGGACCTACATGTTGCAGCATTATGTTTCCAAACCCGGGAACCGGCCGCTCATCCTTTCCCGTGGCCATCCGCGCCCTGGACCTCGAGCGGGGTCGGCTCGAAATCCATAACCGCTTCGATTTTATCGGGCTTCGCGGGTTCCGGGTGTCCTGGGAGATCACCGCGGACGGCAAGTCCCATGCCCAAGGTGAGCTGCCTCCTTTGGAAGTGGCGCCCCACGCGAAACAGGCCCTCAGCCTTCCCTTGCCCGGTCCCCGACCCGTGCCGGGTGTGGAGTACCTGCTTACCGTGGCTTTGCATAGGATACATGGCGAGAACTTGGTACCCGCGGGTCATCGTATTGCCTGGGAGCAGTTTCGGCTGCCCTGGTTTCGGCCGCCCCGGCCCCGAGATCCGGGGGCGGCTGGTGAGCCGACCATGAAACGGACCGATGCCGGTCTGGTCATCACCGGTCAGGATTTCGAGCTGACCTTCGATCCGCGGACCGGCTTGCTTTCGAGCTGGCGTTCAGGAAACAAAGAGTTCCTGGTGCGGGGTGCGGTGCCCAACTTCTGGCGGGCGCCCACCGACAACGATTTCGGTAACGGTCAACAGAAAAGAGCCGGGATCTGGCGTCGTGCGAGCCGGCAGCGGAGCATGCTCGAATTCCGTGCCGTACCCATGAAAGACGGCACCATTCGCGTCTACAGCGCCTGGCTGCTTCCCGACGGCGGGTCCAAGGCCCGGATCGACTACAAGGTCTATGGTGACGGAACCCTGCTGAGCTACTGGGACCGCAAGACCGGCGCCGCGATCGGGCGATACGAGGGTAAGGTCATCGATCAGTATCACCCTTACGCCCGACCGCAAGAGAACGGGAACAAGACCGATGTCCGATGGGCGGCGCTGGCTGATGACGACGGAACCGGGCTCTTGGCCGTGGGGTTACCCGTCCTCAGCATGAGTGCCCATCACTTCACCAACGCCGATTTCGATGAGGGCGAGACCAAGGTTCAGCGGCACACGGTCGATTTGAGTCCCCGTGACCTGGTGACCCTGAACCTGGATTTCAAGCAGATGGGCCTCGGCGGGGACAACAGTTGGGGCGCGCTGGCTCATCAGAAATACAGCATCCTGCCCGTGCCGCTGAGCTACCGCTTCCTGCTGCGCCCGTTCCGGTCTCGGGAGAACCCCGCCGAACTGGCCCGGACCCTCTTCTTCGATGAAGATCAAATCGCCGCCATGACGGGCCGCACGCTCTTTTCCGAAGATTTCGGCGAGCGCAACCGCCGGCGGCACCAGGCAATTGGGTAA

Transcript

ANN31161-RA

Protein

Uniprot

Uniprot term	Description
Q56307	Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847	Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6	Beta-galactosidase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02837	Glyco_hydro_2_N	Glycosyl hydrolases family 2, sugar binding domain	Domain	Interproscan
PF02836	Glyco_hydro_2_C	Glycosyl hydrolases family 2, TIM barrel domain	Domain	Interproscan
PF16353	LacZ_4	Beta-galactosidase, domain 4	Domain	Interproscan
PF02929	Bgal_small_N	Beta galactosidase small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023232	Active_site	Glycoside hydrolase, family 2, active site	Interproscan
IPR006104	Domain	Glycosyl hydrolases family 2, sugar binding domain	Interproscan
IPR006103	Domain	Glycoside hydrolase family 2, catalytic domain	Interproscan
IPR032312	Domain	Beta-galactosidase, domain 4	Interproscan
IPR023230	Conserved_site	Glycoside hydrolase, family 2, conserved site	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR004199	Domain	Beta galactosidase small chain/ domain 5	Interproscan
IPR014718	Homologous_superfamily	Glycoside hydrolase-type carbohydrate-binding	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR050347	Family	Bacterial Beta-galactosidase	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR036156	Homologous_superfamily	Beta-Galactosidase/glucuronidase domain superfamily	Interproscan
IPR006101	Family	Glycoside hydrolase, family 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46323	BETA-GALACTOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004565	Molecular Function	beta-galactosidase activity	Interproscan
GO:0009341	Cellular Component	beta-galactosidase complex	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005990	Biological Process	lactose catabolic process	Interproscan