Gene detail

Detailed information of ANN31306-RA in Montipora grisea

Genomic Location: Scaffold_3074__1_contigs__length_38342:26867...27811
NR annotation: CAE7881961.1, secF [Symbiodinium necroappetens]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8GYD9	Protein translocase subunit SecF OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=secF PE=3 SV=1
Q1RH99	Protein translocase subunit SecF OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=secF PE=3 SV=1
A0LCK8	Protein translocase subunit SecF OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=secF PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0016712 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02355 all species →	SecD_SecF	Protein export membrane protein	Family	Interproscan
PF07549 all species →	Sec_GG	SecD/SecF GG Motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048634 all species →	Domain	Protein export membrane protein SecD/SecF, C-terminal	Interproscan
IPR005665 all species →	Family	Protein-export membrane protein SecF, bacterial	Interproscan
IPR022646 all species →	Conserved_site	Protein-export membrane protein SecD/SecF/SecDF, conserved site	Interproscan
IPR022645 all species →	Family	Protein-export membrane protein SecD/SecF, bacterial	Interproscan
IPR022813 all species →	Family	Protein-export membrane protein SecD/SecF, archaeal and bacterial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30081 all species →	PROTEIN-EXPORT MEMBRANE PROTEIN SEC	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0015450 all species →	Molecular Function	protein-transporting ATPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03074	secF; preprotein translocase subunit SecF	-	Secretion system	ko02044	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.