Gene detail

Detailed information of ANN31325-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:25375106...25377484
NR annotation: CAH3161660.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN31325-RA

ATGGCTTCTTCTCAAGCGTGTAACAAGAAAAAAAGAATAAATTTAACTGAGAATGATGTCCCTGGGGCTTCCTTTAAAAACAAAGAGCCAGAACTTTATCACAACGATCAATTAAGGCGATGGTTGAAGTGCCGAGGTGCTTCAACAAGCGGAAACCGAAGCCAACTACTGCAGAGAGTAAAGAGTTATCAGAGCTCTGGATTTGACAAGATCGTAGATCCTGATGGAGGAATTCATCTTCGGAGAATACGTCTCGAACGTGAAATGCAAACACAACCAGACGAGCCGCAAAGAATCGAGTGGCTAACAGATGGCTGGACTTTATCCAAGGTGAAGGCTTCGATGACTAAGAACAAGCTCTACCGAACACGAGTCTCTCTACAAAAAGAAACTGCTGGGGTGAAAAGTGGATACTGTAATTGCAAAGCTGGGGCTACTGGAAGATGTAAGCATGTAGGTGCGCTACTGTATCTAGATTTTGTAGAAAGTGAGTTAGATCAAACCCCACCTGACACCACATGCACGGAACGACCACGACAGTGGCACAAACCTCGATTAACAGCCTGCGCTGATAATGAGGCTTTACTTCTCAGTGATCTACTTGTCATAAAGCACAGTTACGAGGCTGACAAAAAGTATGACAAAAGTATTAAAATGGCACAAAGAAAAGCTGACAAGCAATCGTTCGAAGCAGCACCATCTTTTTCAAGAAATGTTACTAAAACCCAAATTGAGCGTTTGTGTAAAGACCTGGAGACGACCAGGGGTAAGAGGCCTATGATTATCGACCTTCTGAAAGAAAATAATTACCAGCCCAACATTACTGAGGACATGAAGGCGAAAGAAGCTAGAACACACGTACGTATGGACCACGATTATTGCTCCTCTGGAAAGAGAAAGCATCCTGTGGAGGATGAAGTAACGGCAGATTCCGGATTTCAATTTCCCGTGAAAAAACTTAGGGATGACATTTATACCCCTCTGGATTATAATTTTGGGCGTGATTTCTGCTTGTCCCACTGTGAAACGATTCAGGAAGAGGAACCTGCGTGCAAAACTGTCCAGCAAGAAGTTACTGACAGCTTTACTGAGCTTGGAATTGAAAATGAGCCAAAGGAAAGTGAACAAGGTATCCCTTTGGTAGAAACTCTCGACCTTGAAAAACACATTCTTGCAAGTAAAGGCATTCACGATTCGTGTTCTGACGACTATGACCTTAATTTTGAACAATTTAAAGGCATTTGTAGTTCTTATATGGCATCTCTGAGTATAACTGACAAGGAAATTTCAGAAATAGAAAAGCAAACAAGGGGTCAAACCAACAATGAAAAGTGGTTTCAGTACAGAAGTGGAAGGGTAACAGCTTCTAAATTTGGTGAAATTCAGAACAGGAGACCATCAACAGCCCCTGATAGACTAACCCGTGACATTTTTCAGTACAAAACTAGGTCTGCTGTACCTGCGCAATGTGCCGAGGGTCTGAGGCTTGAACCCTTAATAAGGGAAAAATATGTTGCCAAGCAACAAGCAGCAGGACACACTGGAATATTTGTTGAAGAAAGAGGACTTTTTATAGATAAAACTGCACCACTCCTTGCCGCAAGTATTGATGGGGAAGTCAATGATCCCACTGCAAGACATGGTGCCATTGGAAATTTGGAAATGAAATACATCCAATTCCCCAGTAAAATTCCAGAGCCTGATGGCAGAAAAGAGTTGCTACATATTATTGCTGAGAACAAAAATAATTCCTGCCTTGAAATTACTAACACTGGATTGAAGCTGAAGACTCGACATCACTATTATGCACAAATACAAGGGGGCATGGGCATTTCTGGCAGGCAATGGTGTGACTTGGCTGTCTACACCTACTGTGGTGACATTGAAGACTTGCATGTAGAGAGAATATACTTTGATCCAATTTATTGGAATGCTTTGAAACAAAAGCTTTTGGATTTCTGGTTATTTGCCATTGTACCAGAAATATTAACAAGTAGAATTAAGAATGGAAAACACCTGTATCCAACACTGTTTTCCTATAAGTAG

Transcript

ANN31325-RA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR003034	Domain	SAP domain	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR051703	Family	NF-kappa-B Signaling Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23697	SHB_D_E_F; SH2 domain-containing adapter protein B/D/E/F	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala