Detailed information of ANN31411-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:28137860...28146414
NR annotation: XP_029185798.1, uncharacterized protein LOC114953652 [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010669 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02178
all species →		AT_hookAT hook motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000637
all species →		Conserved_siteHMG-I/HMG-Y, DNA-binding, conserved siteInterproscan
IPR000116
all species →		FamilyHigh mobility group protein HMGAInterproscan
IPR017956
all species →		Conserved_siteAT hook, DNA-binding motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23341
all species →		HIGH MOBILITY GROUP PROTEINS HMG-A AND CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000785
all species →		Cellular ComponentchromatinInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN31411-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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