Detailed information of ANN31440-RA in Montipora grisea

Genomic Location: Scaffold_1184__1_contigs__length_59991:5205...9681
NR annotation: MCE2403359.1, polyribonucleotide nucleotidyltransferase [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B0THS2Polyribonucleotide nucleotidyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) OX=498761 GN=pnp PE=3 SV=1
Q8RA43Polyribonucleotide nucleotidyltransferase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=pnp PE=3 SV=1
Q5WFU8Polyribonucleotide nucleotidyltransferase OS=Shouchella clausii (strain KSM-K16) OX=66692 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013KH_1KH domainDomainInterproscan
PF20244DUF6599Family of unknown function (DUF6599)FamilyInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004087DomainK Homology domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR003029DomainS1 domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR046534FamilyProtein of unknown function DUF6599Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

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