Genomic Location: Scaffold_4582__1_contigs__length_31815:7255...8506
NR annotation: MXW22122.1, 50S ribosomal protein L3 [Candidatus Dadabacteria bacterium]
| CDS | |||||
| ANN31493-RA | |||||
| Transcript |
| ANN31493-RA |
| Protein |
| ANN31493-RA |
| Uniprot term | Description |
|---|---|
| B8D0C4 | Large ribosomal subunit protein uL3 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=rplC PE=3 SV=1 |
| B1I1I8 | Large ribosomal subunit protein uL3 OS=Desulforudis audaxviator (strain MP104C) OX=477974 GN=rplC PE=3 SV=1 |
| Q8R7V4 | Large ribosomal subunit protein uL3 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=rplC PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00297 | Ribosomal_L3 | Ribosomal protein L3 | Family | Interproscan |
| PF00573 | Ribosomal_L4 | Ribosomal protein L4/L1 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019927 | Family | Large ribosomal subunit protein uL3, bacterial/organelle-type | Interproscan |
| IPR009000 | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| IPR023574 | Homologous_superfamily | Large ribosomal subunit protein uL4 domain superfamily | Interproscan |
| IPR019926 | Conserved_site | Large ribosomal subunit protein uL3, conserved site | Interproscan |
| IPR000597 | Family | Large ribosomal subunit protein uL3 | Interproscan |
| IPR002136 | Family | Large ribosomal subunit protein uL4 | Interproscan |
| IPR013005 | Family | Large ribosomal subunit protein uL4-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11229 | 50S RIBOSOMAL PROTEIN L3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0022625 | Cellular Component | cytosolic large ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K02906 | RP-L3, MRPL3, rplC; large subunit ribosomal protein L3 | - | Ribosome | ko03011 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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