Detailed information of ANN31570-RA in Montipora grisea

Genomic Location: Scaffold_7877__1_contigs__length_23877:822...1767
NR annotation: RKU24849.1, transcription termination factor Rho [Candidatus Poribacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P44619Transcription termination factor Rho OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rho PE=3 SV=1
P57652Transcription termination factor Rho OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=rho PE=3 SV=1
O51891Transcription termination factor Rho OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=rho PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00006ATP-synt_abATP synthase alpha/beta family, nucleotide-binding domainDomainInterproscan
PF07498Rho_NRho termination factor, N-terminal domainDomainInterproscan
PF07497Rho_RNA_bindRho termination factor, RNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004665FamilyTranscription termination factor RhoInterproscan
IPR011112DomainRho termination factor, N-terminalInterproscan
IPR011129DomainCold shock domainInterproscan
IPR000194DomainATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR011113DomainRho termination factor, RNA-binding domainInterproscan
IPR036269Homologous_superfamilyRho termination factor, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46425TRANSCRIPTION TERMINATION FACTOR RHOInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006353Biological ProcessDNA-templated transcription terminationInterproscan
GO:0008186Molecular FunctionATP-dependent activity, acting on RNAInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03628rho; transcription termination factor Rho-Messenger RNA biogenesisko03019deepkoala

TOP