Gene detail

Detailed information of ANN31713-RA in Montipora grisea

Genomic Location: Scaffold_1827__1_contigs__length_49129:16743...20360
NR annotation: KAG4082307.1, ubiquitin [Neocallimastix sp. JGI-2020a]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN31713-RA

ATGAAACTGTACTTCAAGACATTGACTGGAAAGACAGTAAGTATTGATGTTGGACTCAGTGACACTGTGGGTGCTGTTAAAGCCAAGGTTCAGGTCATTGAGGGAGTTCCACAAGAGCAGATAAGAATCATTTTTGCTGGAACGCTCCTGCAGGATGATCGTACATTGAATGACTACAACATCCAGAAGGACGACATCATTGATAATAGTGTCAATGTGATCTTGAGGGCTCTTCCAGGCATAAAGATGGTTGTCAAAAAAGCAACAGGAGAATACCTCTGCTCTGTTCCTTTGTACCACCTTGACACAGTTCAGAATGTGAAGGCCGAGATCCAGCTTACGGTGGGTATCCCACTAGGTCATCAGCGACTCTTCAGTCATGGAGTGGAACTCGAAAACTATCGCACATTGAGATATTACAACATCAGCCCAGATCACAATATCCATCTGAACCTTCACTTGTCCAGTTATCACATCTTCATCAGGACTAGTTGGGAAATATTTCCTATTTTAGTAAAGGCATATGATTCCATTGAGGAGGTGAAGGTCAAGATCCAAAATAAACAGAGATACCTACCAGACCAGCAGACACTCACCTTTGATGGACAATTACTTGAGAATGGCCACATGCTATGTGAATATGAGATCAAGCATGAAGCAGTACTTCACCTTACAATTAGTTGGCATGGTACTATTTCTATCAGTCTACCAACAGGAAGACTAGTTACACTTGAGGTTGAGTCCAGGGATACCATTGGTGAAGTGAAAGCCAGAGTCCAGGATAAGGAGAGCATCCCATCAGACCAGCAGTGCCTCGTCTTTAAGGAAACAGAACTAAGTAATGTTTTCACACTGTGTGAATATCACATCCAGAATGAGTCAACACTTCAATTGGTACCACATGTACTTGGCCGCATCCAGGTCTCGGTTAGGTCCCACACTGGAATAATCTTTACCCTTGAGGTTGCTGCTAGGGATCGCATTGAAATCTTGAAGGGCAGGATTCATAATAAGAAAGGCATTGCACCAGACCAGCAGTGTCTCTTTATTCCTGATGGCACACGGCGTATCGAGCTTAAGGATGGCCAAAGAGTAAGCGACTACAACATTAGGAGTGGCTCAACACTTCATTTGATTACACCAGTACCTGTCAACAACAGTATTAGACACACTCTGAGCAGTTCTGCTGATACACACAAGGAAGACTTACAGAGCCTTCATGACCAGGTAGAGCAACTCTTTCGAAAGACTCATTATCTGGAAGATGATGCCCACCTGCGACAACAAGAACAGCAGGTAGTACGGGAACAATTCCAGCAGGAGATTGAGAGGCTACAGGCTGAACTAGAAAGACAGCAACAGTGGGCGAATGAAGAGTTGGAGAGATGGGTAGCCACCTTGCAGGAGGAGCTGTCCAGAGAGCAACAACAACAGCTGACACTTCTGGAAAGAGTAAGGGAAGCTGAACAGAGGGCAGACACTGCTGAAGAAAGTCTCCGCAATACCCTAACAATTAGGGGCTCTTCCGGTCACATTGATGAACAATCGTGGGTAGTTAACAAGGAGGAAATTGAGTTTACTGGTCAAGAGCTGGGGAAGGGAGGGTGGGCCATCGTGAAGGTGGCCAAGTTCCGGGGTCTTCAAGTTGCAGCCAAGTGTCTTCATAGTCTCATTGTCTCTAGCTACAACAGACAGCTGTTTGCAAGAGAAATGAGCATAGCTTCCCGGGTACGTCATCCCAACCTGGTCCAGTTTCTGGGGGCCACAGTGGATGGAGAACCCACCATCTTGATGGAAAAGATGTACACCAGTCTGCGGTCAGTCCTTGAGCGAAGGCCATTCAACCCTCCACAAATCACCTCCATTGGTCTGGATGTGGCCAGGGCACTCAACTACCTCCATCTAATGCAGCCAGACCCAATTATTCATCGTGACATCAGTAGTGCCAACGTTCTCCTTGACCCGGGTCCTGACAACACATGGAAGGCAAAAGTCTCTGATTATGGCTCAGCCAATCTCCTACTGCACTTAAACACATCTTCTCCTGGTAGCCCTGTCTATGCTGCCCCTGAGGCTGGTGAGCCCACCCGCCAATCACCCAAGATGGATGTCTACAGCTATGGGGTGTTGCTACTGGAAATGTGTACTCGTACATTTCCTAATCCTGGCAACCGGGACACCCTTGTGCAGACTGTCAAACACCCAAGAATGGCTACACTGATTCAACAATGCCTGCAGCAAGAACCAAAAGATCGTCTGCCAATGACAACAATTGTAGACCATGTACTGCTAGCCTAA

Transcript

ANN31713-RA

Protein

Uniprot

Gene family

Uniprot term	Description
P0CG82	Polyubiquitin OS=Tetrahymena pyriformis OX=5908 GN=TU20 PE=3 SV=1
P59669	Polyubiquitin OS=Geodia cydonium OX=6047 PE=2 SV=2
Q58G87	Polyubiquitin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=UBQ3 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	ULD\|UBL\|NEDD8
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR050158	Family	Ubiquitin and ubiquitin-like	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10666	UBIQUITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019941	Biological Process	modification-dependent protein catabolic process	Interproscan
GO:0031386	Molecular Function	protein tag activity	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan