Gene detail

Detailed information of ANN31796-RA in Leptoseris scabra

Genomic Location: Scaffold_14__1_contigs__length_37721450:37354692...37360081
NR annotation: CAH3014726.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN31796-RA

ATGGCAAAACACGTGGAAGGACAAACTGAGACAACCACCGTTCGGTCATCTTACTCAGAACCTGCTCCAGAGTCTTCTCGAAAGGTAATGGCTTCATCGCTGAAATTTCGAGAGGAATCTGATTTCTTGCAAAGGCATAAAGAACCTCGTAACACCATGCACGTTGCAGCTGAAAGTATCCCAGATCGGACAACAGATTTTACTACCAGCAAAAGCGATTTATCAGCTTCAATTGATATCTCGCGCATGACAAGGAATATCTCAAACCTTCCAAAGAATGTAGATCCCGAGATGGCCGCGCGCAGATTAGTGGATCACAACCGAGGGAAGTTAAGCAGCCATGACACAAAAGTCAGTCTCACTATGCCATCAGAAGATCAAAATTTTAATGTCTTGCCACTGCTCAAAGAACCTTTCAGATTAGTGGATCACAACGAAGGGAAATTAAGCAGCCCTGACACAGAAGTTAGTCTCACTATACCATCAGAAGATCAAAATTTTAATGTCTCGTCAACACTCAAAGAACCTTGCAGATTGGTGGATCACAATGAAGAGAAATTAAGCAGCCCTGACACAGAAGTTGGTCTCACTGTACCAGCAGAAGATCAAAATTTTGATGTCTTGTCACCGCTCAAAGAACCTTGCAGATTGGTGGATCACAATGAAGGGAAATTAAGCAGCCCTGACACAGAAGTTAGTCTCACTGTACCAGCAGAAGTTCAAAATTTTGATGTCTTGTCACCACTCAAAGAACCTTGCAGATTGGTGGATCACAATGAAGGGAAATTAAGCAGCCATGACACAGAAGTAAGTCTCACTATACCATCAGAATATCAAAATTTTGATGTCTTGTCACCGCTCAAAGAACCTTTCAAGATAATGATCGATGCTGACGCTGAAAGTATATTCGAACAGAGCATAGAATGGGAGCATGAGGAGATACGTTCCACCGGAAGCAACGATTCAGCTGCTTCAGATGTCTCTCGAATGATATGGAATATCTCAAACATTCCAGTAAATGCAGATCCCACAATGGTCGCGCGTGGATTCGTGGATCACGAAGGAGGGAAATTAACTATCGGTGACACAGGCGTGAGTCTCACTATACCACCGCAGGCTATTCCGGAGGGTCGCATTGAAGGGATATTCATAGCTATCATGAACCAAGAAAAGGAACATCCAAACGTTACTTCCAAGGAGCCCCTGTTGAGCCCAGTGGTGACGTGTGGTCCTAATGGCCTCAAGTTTAACCGTCACGTGATTCTCAGTTTGCCGCATTGTGCTCTTCTTGGGAATGGGTCTTGGAATTTAAAAGTCCAGTACAATGAGAGTGACCTTGGGGGGCCAGCCAACTGGAAGGAGTTGATTGACGTCAACAAACAGGATGGTTCTGAGCCGCATTTAGCTATAGTAGAACCAACAATGGTCCATATTATGGTGGATCATTTCACTGGTTTCACTGTGACCGGAGAGCCAGTTTCCACGGAGAGCGCAAGGAAAGCAGTGCGGATTGTAGCGTATGTGACCCCGCCCGAGGCTAGTGGGAACTGTGTTGTGAGGGTGTATTGTGTCGGCGATACTCCAGCACATTTAGAGGTCTGTGGGTTTGGAACATTTTCTGAAAATAATGGTTTACACAATCAAGAACAGGAGAAATTAAACGGTATTACGATGGATGCACCGAAGCCATTTCATTTGAAGGATGGAGGAGGTGATGTTTTGGTGAAGATTACAAACTATCACCCCGGGTGGACAAAAACGTGTGAAGACCAAAAGAAAATCTACTTCCAACACATATGGGAAGGTATTGAGCGCATGCCCTGTTGTACGTTTGTATTCTCTTTGGCTGGTGAAGGCGTCCCTCAGTTTCATGCAGCATTTGGAGTCAAACAGGATTGCCAAGATGGCGATGAACAAGAAGTTATTGTCTCCACACCGATCAAAGAAACTCAACAAGCAACTAGCAAAATCTCTGCAGGTGATGCTCTCGATGATGTACTGTCTGTACTGAATGCAGTTTCAATTGGTAATGCCACAAAATCTTCGTCGCCAGTAAATGTTCCACCTGACGCAGGCAAAAGAGGTCCTATTGCGTCTCCATCTCATACGAAAGACACATCCTCCGGCTGTTGTTCGTATGATTCTGAGCCTTTGCAACTCACGGACTCACTGACACAAAGAAAACGTATTGAGCTTAAATTACACCTTGATCCACCACATCCTACAGCCAATTGGAAGCACTTGGCCGAAGATCTTGGCTTCGAGACAAAGCTCATTCGCTGGCTGGAAGCCCAAAAATGTCCTTCCCCTACGGACTCACTGTTAACATTTATGGAGACTCGCAACTACCCCCTCAGTAAACTGGCTGAAACACTACGTAAGCTGGGCCGGGACGACGCGGCCAAGATTATTGAAGATCAGCTGATGTTGGAAGAGACTTCCGATTAG

Transcript

ANN31796-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O08721	Netrin receptor UNC5A OS=Rattus norvegicus OX=10116 GN=Unc5a PE=1 SV=1
Q8K1S4	Netrin receptor UNC5A OS=Mus musculus OX=10090 GN=Unc5a PE=1 SV=1
Q6ZN44	Netrin receptor UNC5A OS=Homo sapiens OX=9606 GN=UNC5A PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004837 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00791 all species →	ZU5	ZU5 domain	Family	Interproscan
PF00531 all species →	Death	Death domain	Domain	Interproscan
PF17217 all species →	UPA	UPA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000906 all species →	Domain	ZU5 domain	Interproscan
IPR037936 all species →	Family	Netrin receptor UNC5	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR000488 all species →	Domain	Death domain	Interproscan
IPR033772 all species →	Domain	UPA domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12582 all species →	NETRIN RECEPTOR UNC5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005042 all species →	Molecular Function	netrin receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0038007 all species →	Biological Process	netrin-activated signaling pathway	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN31796-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.