Gene detail

Detailed information of ANN31910-RA in Montipora grisea

Genomic Location: Scaffold_6466__1_contigs__length_26948:16278...20857
NR annotation: MBL1142335.1, tail-specific protease [Pseudomonadota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN31910-RA

ATGCGTCTGTTATCTAAAAATGCTGTGCTTTACACTGAAATGATTACGACAGGTGCGTTGATTCATGGAGATCGAGAACGGTTTCTAAAGTTTAATGATATCGAACATCCTCTCGCTATCCAGCTTGGTGGAAGTAATCCGGAAGATTTAGCATTATGCGCCAAGATGGCAGAGGAGCATGGCTATGATGAAGTAAATCTTAATATAGGTTGTCCTAGTGACAGAGTTCAAAATGGTCAGTTTGGAGCTTGTTTAATGTCAAATAAAAACCTGGTCGCAGAATGCGTAGCTAAGATTAAATCGAAGATTAAGATACCCGTCACAATAAAAACGCGTATTGGCATAGATGATATGGATTCCTATGAGTTCTTTTCTGATTTTATCGATACAACCCATGCGAGTGGTTGTGACACATATATAATTCATGCTCGGAAAGCTATTTTGAAAGGCTTAAGTCCAAAAGAAAATAGAGAAATTCCTCCACTAAAGTATGACCGTGTTTATAAGTTGAAAAAAGATTTTCCAGATTTAAATATATCTATTAATGGTGGGTTTACTGAAGTTGATGTAGTTATCAACCAATTAGATAAAGTAGATGGCGTAATGATTGGACGGGCGGCATATCAAAATCCTTATATGTTGACATTGGTAGATAATAAAATCTTTGGCTTATCTGAAAACTCTTCAAATCGAATTGATATATTAAATGAATATAGAAACTATATTGATGCACAGTTATCTCAAGGTGAAAAAATCAAAAACATGACGAGACATATTATTGGTCTTTATCAAGGCCAACCAGGTGCAAAAAAATACCGTCAACTTCTTTCTCAAGCCATCCCTGAAGGAAAAAAAGAAATTCATTTTTTTGATGACGCGATGAATTCGGGTATGGAATTGGATAATGATGCTTTTTTGCAGGCAGTGAAAGATGTTTTAAATAACAACGAACTGAAGCTAAGTAAGGAAGAAATGCAACAAATCTTGACTGACTTTCAGAAAAAAGAACAAGAGGAACTTGCAGCGGCCGCCTCAAGTAATAAGGAAAGTGGAGAAAAATTTTTAAGTGAAAATAAAAATAAAGAAGGCGTTAAAACAACGGATAGTGGACTTCAATATAAAATTATCGAAGCAGGCGAAGGAGAAACACCTAAAGCCAATAGCAATGTCGTAGTTCATTATCGTGGAACATTAGTTGATGGTACTGAGTTCGACAGCTCGTACTCACGTGGTGAACCTGCAACTTTAGGTGTAAATCAAGTCATCAAGGGATGGCAAGAAGCATTACAAATGATGCCGGTCGGATCCAAATGGCAAATTTATGTGCCATCAGATTTAGCATATGGCCAACGAGGCGCAGGAGCAAATGATGATGTCGAAATCGACCCGGAAAAATTATATCTTTCTGGTTTGGCGCACTATGAAAATAAAGAATATGAAAAGGCTGTTACTGATTTGAAAGTTGCCGTTGAAAGAAAACCAGAGACTGCTAAATACCATCATATATTAGCAGTGAGTTATGGCAGAGAAGCACAAAATGTAAACTGGTTTAAAGCGATGGACTATGCCAAAAAAACGCTGCTTCATCTTGAAAAAGCAAATGAGCTTGACCCTAATAATTTGGAAATTCTTGACGATCTAATGGATTATTACCATGAAGCGCCTGGGTTTCTTGGAGGAGACAAAGAAAAAGCACTAATCGTCTTTGCGGCGGGCGTGTTTGCAGAAGTTCGCACCGTATCTGTCTCTGAGCTGGAACCCGAAAATAAACACATCAGAGCAAGCGAGCTAATTACTCACATTCTGACGACTTATCACTATAAGAAAACAGAACTAGATGATGAGTTATCGGCGTCAATCTACAAACATTATTTGGAAAATCTAGATCAAAACAAAGCTTATTTCATCAAATCAGATATAAACGAGTTTGAACCGTATCGTTTCAAGATAGATGATGCGCTAATTAAGTCCGATCTAAGTCCAGCGTACAACATATTCAAACGCTATCGACAACGTGTTGATGAGCGAATCGATTTTGCGCTCAAAACTTTAGAACAAAAATTTGATTTCACAATAGACGAATCATATCGATTCGATCGCCGCGATGACGATTGGTCAAGTAGTCGTGAAAAACTTGATGAATTATGGCGAAAACGTGTAAAGAATGATGTTTTTATGAATCTACAACTAGCAAAAAAAGATAATGCTGAAATTAAAAAAACATTAGCAGCACGTTATGAACGTATCAGAAGCAGCACATTTCAGTTAAATTCGAATGATGTATTTCAATCCTTTATTAATGCATATACCACATCAATAGAACCACATACTGCTTATTTTTCGCCACGTACCTCTGAGAACTTTGATATTAGTATGCGTTTATCGTTAGAGGGCATAGGTGCAGTCCTACGCGCAGAAAATGATTACACTCAAGTTGTTAAAGTTATCACTGGTGGCCCTGCAGACTTAAGTGGGCAAGTCAGTGCTGACGATCGCATCATAGGCGTGGGTCAAGATAAAGACGGTAAAATAGAAGATGTAATTGGTTGGCGCCTTGATGATGTCGTTGATCAAATACGTGGGCCTAAGGGCACTATCATAAAATTAGAAATATTACCCAAAGGAACAGGACCAGAAGGACCTTCCAAGATTGTCACGTTAACACGTGAAAGAATCAAATTAGAAGAACAAGATGCAAGTTCAAGCATAATAGAAATCCCAGAAACTAATACAAAAATTGGGGTTATTGATCTACCTACTTTCTATATTGACTTTGCTGCACAAGCGGAAGGTAAAAAAGACTATAAAAGTACCTCTCGTGATGTAAGAAAATTAATCAAGGAAATGTTAAAAGAGAACATTGATGGATTAATCGTCGATTTGCGAAATAACGGAGGTGGTTCACTTTCTGAAGCGCTTGAATTAACTGGTTTGTTTATAGACCGAGGCCCAGTAGTACAAACTAAAGATGCATCGGGTAGGGTTGATATTAATTATGATCCTGAGCCTGGAATTAGCTATCCTGGCCCACTGGCTGTTCTTGTTGATCGCAACAGTGCTTCCGCATCTGAAATTTTTGCTGGCGCAATTCAAGATTATCGTCGGGGTATTATCATTGGTGAGCCCACCTTCGGTAAAGGGACAGTCCAAAACGTTATTGATTTAAATCGATTCATCAGTGAGAGCAAGGAAGATCATGGCCGACTAAAAACAACCATTGCCCAATTCTTTAGAGTCAGTGGTGGTAGCAATCAATACAAAGGTGTCATTCCAGATATAATTTTTCCTACCGCTGAAGATGCCTCTGATCAAGGGGAACGTGCTTACGAAAATGCACTGCCCTGGGATCAAGTCAAAGCAGCGCGTTATTATCCCGCCAGCGCGCCTATTGATAGTTTTATACTAGCAAAACAAGAACATGAAAAAAGAATAAAAAATAATAAACTTTTTCAACTACTAATGGATGATGTTTACCTGCAACGTGAAGCGAGTGAACGAAAAGAAATTCCTTTATTAAAAAGCAAACGAAAAGCAGAACGTGAAAAAATATTAGCCGCTAAAAAAGAAATTCAAAATGCGATGCGAGCAGAAAAAGGATTACCACCATTAAATGATGATGATGAAATTGATCTTGATGATTCTGAAAAAGAAAATGAAGAAGATGAACCCATTGATATCTTATTAAATGAAACAGCAGCTATACTCAATGATTTAATCAAGGCACCTACGATAAAAAAAGTTGATACACGAACGGTTAAAGCAGAAAAATCTGTTAGACCTAATAACAATCTGTAA

Transcript

ANN31910-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P43669	Tail-specific protease OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=prc PE=3 SV=2
P23865	Tail-specific protease OS=Escherichia coli (strain K12) OX=83333 GN=prc PE=1 SV=2
P45306	Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=prc PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0025838 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03572 all species →	Peptidase_S41	Peptidase family S41	Family	Interproscan
PF17804 all species →	TSP_NTD	Tail specific protease N-terminal domain	Domain	Interproscan
PF00254 all species →	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF01207 all species →	Dus	Dihydrouridine synthase (Dus)	Family	Interproscan
PF01346 all species →	FKBP_N	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase	Domain	Interproscan
PF11818 all species →	DUF3340	C-terminal domain of tail specific protease (DUF3340)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005151 all species →	Domain	Tail specific protease	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR046357 all species →	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR001179 all species →	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR040573 all species →	Domain	Tail specific protease, N-terminal domain	Interproscan
IPR004653 all species →	Family	tRNA-dihydrouridine(20/20a) synthase	Interproscan
IPR018517 all species →	Conserved_site	tRNA-dihydrouridine synthase, conserved site	Interproscan
IPR004447 all species →	Family	C-terminal-processing peptidase S41A	Interproscan
IPR035587 all species →	Domain	DUS-like, FMN-binding domain	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR000774 all species →	Domain	Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal	Interproscan
IPR029045 all species →	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR020992 all species →	Domain	Tail specific protease, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42907 all species →	FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003755 all species →	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0002943 all species →	Biological Process	tRNA dihydrouridine synthesis	Interproscan
GO:0017150 all species →	Molecular Function	tRNA dihydrouridine synthase activity	Interproscan
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN31910-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.