Gene detail

Detailed information of ANN31958-RA in Montipora grisea

Genomic Location: Scaffold_1287__1_contigs__length_57924:10153...12243
NR annotation: MCP4078797.1, elongation factor G [Planctomycetaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN31958-RA

ATGCCCGATGTCAAATCGATCCGTAACATTTGCCTCTGTGGTCACGGGTCTGCTGGAAAAACGACGATCGCAGACTCGCTCCTTGCGCTAACGAAGGCCGTTTCCTCGACACCCAGCGTCGACGACGGCACCAGCATTTGTGACTTTGATCCCGAAGAAAAAGGTCACAAGTACACCATCGAAGCTTCGGTTGTCAACTTTCAACATCAAGGGAAACACTTCAACCTGATCGACTCGCCCGGCTACCCGGATTTCATTGGCCAGACGATTGGCGCGCTCAGTGCAGTCGACACCGCGGCAATCGTCGTTAACGCTCACTCGGGCATCGAAGTCAACACGCGACGCGTGTTTAAAGAGGCCGGCAATCTGGGACTCGGTCGAATGGTCATCATCAACAAGATGGATGACGAAAACATCGACTTTGAAAGCTTGGTCAATGACATTCGCGAAATGTGGGGCAGCCAGTGCGTTCTGCTGAATGTGCCAATCGGATCTGGTCCAGATTTCAAAGGCGTTGTCAGCACATTGAAGCTTCCCGATGACACGGCTGGCGCGCTAATCGATCCTGCGGGTATCAATGAATCGTTGATCGAATCGATTATCGAAGTCGACGAAGCAGTAATGGAACAATACTTTGAAGGAAACATGCCCAGCGATGCGGACTTGTCGCGACTGATCGTCCGCGCGGTCAAAGAAGGTAACCTGATTCCAATTGTTTGCTGCAGTGGCAAGACCCAGGTCGGTCTAAGCGAACTGGTCGATGCCTTCGCCAAGTGCGGACTTTCGCCTGAAGACATCACTCGCGTCGGCAAGAAGGACGGCGAAGAGGTGACGCTTGAGCCCAAAGCGGATGGACCTTTGGTGGGCCATGTGTTCAAGACTCGAATTGACCCGTTCGTTCAGAAACTCAGCTTTATCCGGCTCTACTCTGGAACACTAAAACGGGATACCAACGCTCCCACTTCGTCTTCGCGCAAAGACTTGAAACTGGGGCAGCCGTTGCGAGTCCAAGGTGAAGCAACCGAAGCGGTCGATTCAGCGGGCCCCGGAGACATCGTGGCGATCGCCAAAATGGATGAACTGCATACCAATACATCCATCGGTGAACTCGTAATCGAACCTATCAAGTTCCCAACGCCGATGGTCTCGTTGGCCGTTACGCCGAAAACGCGTGGTGACGAAACGAAACTATCTGGCGCGCTTTCAAAAATTGTTGAAGAGGATTCGACCATCAACTTGGACCGGGATGCTCAGACCAAGGAATTGGTCATGACGGGGATGAGCGAACTGCACCTGAACATTATCCAAGAACGCTTGAAGCGCCGCGACAAGTTGGAGGTGGAAACGAAAGAGCCCCGAATTGCCTTCCGCGAAACGATTCAAACGGAAGCCGAGGGCAGCTACCGTCACAAAAAGCAGTCGGGCGGTCGTGGTCAATTTGGCGAAGTTCACATTCGGATGTTCCCACTGCCCCGTGGCACCGACATCGAAGAATACGCGGTGAAAAGCCGATTCAATTCGATGCGGGCGACGCACTACGACGAGAAGGCCAACTTCCTGTGGGTCGATTCGATTGTGGGGGGAACCATCCCGACCAACTTTATGCCAGCGGTCGGCAAAGGATTTACGGAACGCATCTCGACCGGCGTGATCGCCGGTTACCCGGTGCAAGATGTCTGCGTGGAAGTCCACTTTGGCAAATATCACGATGTGGACTCCAGCGAAGCGGCATTTAAAACTGCGGCCCGTCACGCATTCAAGCAAGTTTTTGAAAAGGCCCGACCAAGTTTGTTGGAACCGATCGTCCACTTGGACATCACCGTTCCAGAAGCCAACGTCGGCGATGTCTACTCGGATATGTCTTCGCGAGGCGGCCGTGTCTCGGGAAGCGATCCAGCCGGTGGAAACTTCACCACCGTTCATTGCGAAGTTCCATTGCGCGAAGTCACGACTTATGCTCGAACGCTTTCCAGCATGACCGGTGGACTTGGCAGCTACACAATGGAGTTCAGCCATTACGATGTGATGCCGCCGAACATCCAACAGGATGTCATCAGCAAAGCGTCCATTAAAGACGACGAAGACGAATAG

Transcript

ANN31958-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9X1Y4	Elongation factor G-like protein OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_1651 PE=3 SV=1
B9L7K0	Elongation factor G OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) OX=598659 GN=fusA PE=3 SV=1
Q8R7V1	Elongation factor G OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=fusA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001970 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03764 all species →	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan
PF14492 all species →	EFG_III	Elongation Factor G, domain III	Domain	Interproscan
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035649 all species →	Domain	EFG, domain V	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005517 all species →	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR047872 all species →	Domain	Elongation factor G, domain IV	Interproscan
IPR041095 all species →	Domain	Elongation Factor G, domain II	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR009022 all species →	Domain	Elongation factor G, domain III	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43261 all species →	TRANSLATION ELONGATION FACTOR G-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0032790 all species →	Biological Process	ribosome disassembly	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02355	fusA, GFM, EFG; elongation factor G	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.