Detailed information of ANN32001-RA in Montipora grisea

Genomic Location: Scaffold_2802__1_contigs__length_40016:5903...6892
NR annotation: CAG4646698.1, EOG090X0I63 [Macrothrix elegans]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9HWC4Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nusG PE=3 SV=1
P0AFG1Transcription termination/antitermination protein NusG OS=Escherichia coli O157:H7 OX=83334 GN=nusG PE=1 SV=2
P0AFG0Transcription termination/antitermination protein NusG OS=Escherichia coli (strain K12) OX=83333 GN=nusG PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00298Ribosomal_L11Ribosomal protein L11, RNA binding domainDomainInterproscan
PF00467KOWKOW motifFamilyInterproscan
PF03946Ribosomal_L11_NRibosomal protein L11, N-terminal domainDomainInterproscan
PF02357NusGTranscription termination factor nusGDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006519FamilyLarge ribosomal subunit protein uL11, bacterial-typeInterproscan
IPR001062FamilyTranscription antitermination protein, NusGInterproscan
IPR047050DomainNusG, N-terminalInterproscan
IPR015869Conserved_siteTranscription antitermination protein, NusG, bacteria, conserved siteInterproscan
IPR020783DomainLarge ribosomal subunit protein uL11, C-terminalInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR005824DomainKOWInterproscan
IPR000911FamilyRibosomal protein uL11Interproscan
IPR020785Conserved_siteLarge ribosomal subunit protein uL11, conserved siteInterproscan
IPR036796Homologous_superfamilyLarge ribosomal subunit protein uL11, N-terminal domain superfamilyInterproscan
IPR036769Homologous_superfamilyLarge ribosomal subunit protein uL11, C-terminal domain superfamilyInterproscan
IPR006645DomainNusG-like, N-terminalInterproscan
IPR043425FamilyNusG-likeInterproscan
IPR036735Homologous_superfamilyNusG, N-terminal domain superfamilyInterproscan
IPR020784DomainLarge ribosomal subunit protein uL11, N-terminalInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30265RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0032784Biological Processregulation of DNA-templated transcription elongationInterproscan
GO:0006354Biological ProcessDNA-templated transcription elongationInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

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