Detailed information of ANN32004-RA in Montipora grisea

Genomic Location: Scaffold_2802__1_contigs__length_40016:30528...31588
NR annotation: NNG12984.1, valine--tRNA ligase [Halobacteria archaeon]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q606C1Valine--tRNA ligase OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=valS PE=3 SV=1
Q0VSA8Valine--tRNA ligase OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=valS PE=3 SV=1
Q3JC50Valine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=valS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0029920 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133
all species →		tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF13603
all species →		tRNA-synt_1_2Leucyl-tRNA synthetase, editing domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009008
all species →		Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002300
all species →		DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR001412
all species →		Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR002303
all species →		FamilyValine-tRNA ligaseInterproscan
IPR025709
all species →		DomainLeucyl-tRNA synthetase, editing domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946
all species →		VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002161
all species →		Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0004832
all species →		Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0006438
all species →		Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN32004-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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