Gene detail

Detailed information of ANN32039-RA in Montipora grisea

Genomic Location: Scaffold_2496__1_contigs__length_42269:21472...25181
NR annotation: WP_101564254.1, acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [Alteromonas macleodii]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN32039-RA

ATGCGCCAAGTGTGGAGTGAAAAAGAGTTTTCTCAAGCATTAAGCGCAGCCAAACGTGAATCTATGGCGAGCTTTGGTGACGACCACATGCTGGTTGAAAAGTACCTGACGCGCCCTCGTCATGTTGAAATTCAAGTTTTCTGTGACACCCATGGTAACGGCGTATACCTTTTTGAACGTGATTGTTCGGTTCAACGCCGACACCAAAAGATTATTGAAGAAGCCCCTGCCCCCAATATGTCTCAGTCAGTGAGAGAAAAAATGGGTGAAGCGGCGATACTCGCGGCGAAAGCCATTAACTACGTAGGTGCGGGAACGGTTGAGTTTTTACTTGATGAAGACGATTCGTTTTACTTCATGGAAATGAATACACGCTTGCAAGTAGAGCATCCTGTGACAGAAATGATCACCCGAGAGGACTTGGTTCACTGGCAATTAACTATTGCCGAAGGAAAGCCCCTTCCCAAAGAACAAAATGAACTCACCTTAACAGGACACGCATTCGAAGCGCGCATTTATGCTGAAGATCCAAACAACGAATTTCTGCCTTCTACCGGCACGCTGTGCCTTTTACGTACGCCAAAAGAAAACGACGTAGTTCGCGTTGACACAGGTGTCGTTGAAGGTGATGAGGTAAGCGTTTTTTACGACCCAATGATTGCCAAGCTTGTGGTTTGGGGAGAGAACCGTGAGATAGCGCTCAAACGCTTAATTAGTGCATTGGGTGACTACTATATTGACGGTGTAAGCACAAACATCGACTTCTTAAAGCGTGTCGCAACACACCCTGCGTTCGTTGCCGCTGAGCTTACAACTACGTTTGTGGAGAAACACCATGATTCGTTGTTTAGCGCGACAAAAAAGTTTCTAGAAGCGATAAAACCCCATCTGTTTGGTCAACCGTCGGTGCGTGGCGCGCTAACGCAAATCATACAGAAAATTCTCACCTTGCTTTGCAACCAAGAAGAAGTGCATGTTAAGGTCAAACATCAGCGTCAAGAAACTGAAGATGCTTGGGAGCTATCTGTTGGAGACAATTCCTATAACGTTAAAGGCAAGCTGGTAGATAGTGCTTTGCATGCAACAATTAATGGGTACAAATCAACATTTACGTATTCAGATAATGATGGCGTGTTTACACTCTTCAACAAAGACACCCATGCTAAGTTCACCCTAATCTCAGCATCTCTTGGTGATGATAACGATGATAATGGCGACGCTAATTTTAGTGCCCCGATGAACGGAACCATAGTGGCGCATTTGGTCGAAAAGGGTGTGTTGGTCAAAAAAGGGGAGCCTATACTAGTTATGGAAGCGATGAAAATGGAGCACAGCATCATTGCCCCGCACGATGGTGCAGTGGAAGATTTCTTTTTCAATCCCGGTGAACTAGTTGACGGTGGCGCAACACTGTTGGCGTTCTCCACTAAAGAAGCTGCCGAGAACGAAAAGCAGGCCTTAAGTGCTGAACAAAAGATTGAGCTTATTCAACTTCTTTCTAAAACTGGCCTTAACCGAATCGAAGCAGGAAGCTTTGTATCGCCCAAATGGGTGCCTCAAATGGCGAACTCGGATGCGGTTTTTAAGGCGCTTAGCCCCGAAGACAAGATTCATTATTCTGCATTGACACCCAACCTTAAGGGCTTGGAAGCAGCCATTGAAGCGGGTGCGAAAGAGGTTGCAGTATTCGGTGCTGCCTCTGAATCCTTTTCACAAAAGAACATTAACTGCTCTATAAGCGAGAGCTTAAAGCGTTTCGAGGCTGTGTTTGACCTGGCAAGCGAAAACAAAATCAAAGTGAGGGGCTACGTTTCATGCGTAATGGGGTGTCCTTATGAAGGTGAAATTTCACCTAGTGCCGTTACACAGGTGAGTAAGGAACTTATTGACATGGGGTGTTACGAAGTATCCCTTGGCGATACTATCGGCGTAGGCACACCAATGTCTACAAAACTGCTATTGGATGACGTATTGAAAGAGATTAATGTCAACAACGTTGCCGCCCATTTCCACGATACTTATGGACAAGCGCTAGTGAACTTATACACTGCCCTTGGATATGGCATCTCTTCCATTGATTCAGCTGTTGCAGGACTTGGAGGCTGCCCGTATGCCAAAGGTGCAAGTGGAAATGTTGCAACTGAAGACGTCTTATATATGTTAAACGGTATGGGTATATCAACAGGAACCGTACTCACTCAAAAGTTTATGAAGGGCGAAATCTTGAGCGAAAGTGAGTATGAGACAGTTAAAAGTACTGCTGATGTGTATAGAAAAAGGCTCTACGACATAAGCTGGTTTATGAGAAATTTAAACGAGTATATTGCGAGAAAAGCGAACGAAGAGGACGATTGTACTGGCAGATTTTGGGAAGGTCGCTTCCGTTCACAAGCATTGCTAACAGAAAAAGCTCTACTGTCTTGTATGGCATATGTTGACTTAAACCCTATACGCGCAAAGGTCGCAACCGGCTTACAAGACTTATATCACACAAGCATTAATAAAAGATTGAACACGAATATTTCGCAAAACAAGACGATAAAAGGATTAATGCCATTAAGGAGCCACCAACGATGTAGAAACACTCGTGGCTTAGATTTCACATTGAATGACTATTGCGATCTTCTTAACCAGTCAATCGAACTGTTGCGCGACACCGATTCGACAGCCGCTCAAACGAGACCCATTCAACATGTAAAACCTCTTGGTGTATGCCAACATCATTGGCATCACATTATCAGTGATTTCGAAAACATGTTTTCAGTCGCGGCAGGAGACGGTTCATCTATGCGGAAATTCCAAGCAAATACTAAAAGAAAACGAATGGCCAAAATATCTTCGGCAGCGATATGCTTTGACTAA

Transcript

ANN32039-RA

Protein

Uniprot

Uniprot term	Description
Q54KE6	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=mccA PE=3 SV=1
Q99MR8	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Mccc1 PE=1 SV=2
Q5I0C3	Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF00682	HMGL-like	HMGL-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011053	Homologous_superfamily	Single hybrid motif	Interproscan
IPR005482	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR005479	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR000089	Domain	Biotin/lipoyl attachment	Interproscan
IPR000891	Domain	Pyruvate carboxyltransferase	Interproscan
IPR050856	Family	Biotin-dependent Carboxylase Complex	Interproscan
IPR036515	Homologous_superfamily	Transposase IS200-like superfamily	Interproscan
IPR011054	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR001882	Binding_site	Biotin-binding site	Interproscan
IPR011764	Domain	Biotin carboxylation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18866	CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004803	Molecular Function	transposase activity	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan