Detailed information of ANN32041-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:5363479...5377767
NR annotation: CAH3192750.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
D8VNT0Ryncolin-4 OS=Cerberus rynchops OX=46267 PE=1 SV=1
Q7ZT72Ficolin-1-B OS=Xenopus laevis OX=8355 GN=fcn1-b PE=2 SV=1
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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