Gene detail

Detailed information of ANN32130-RA in Montipora grisea

Genomic Location: Scaffold_1177__1_contigs__length_60122:48241...50387
NR annotation: KAF1853252.1, hypothetical protein Lal_00009613 [Lupinus albus]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN32130-RA

ATGAATACTAAAATCAGAATTGCTGTCCAAAAATCTGGACGTCTTAATGAGAAATCCTTGGCACTCCTTAAAAGCTGTGGAATCTCAATAGATAATGGGAAAGATCAACTAAAAACAACTGCCAGAGATTTTCCTTTAGAAGTTTTTTATCTACGTAATGGAGATATCCCTCAATACCTTAGAGATGGTGTTATAGACATTGCCATATTAGGTGAGAATACACTTATTGAGAAAGGAGAAGATTTACAAATCATAGAACGTTTAGGGTTTTCTAAATGCAGAGTTTCCCTAGCGATACCTAAAAATGAAAACTATACTTCTGTACAAGATTTTGAAGGTAAACGCATTGCTACTTCATATCCAAATACTGTGAAGAAATACCTTGATGAAAAAGGAGTAAATGTGGAATTACATATTATTAATGGCTCTGTAGAAATTGCTCCTAATATTGGTCTTGCGGATGGCATATGTGATATTGTCTCTAGTGGAAGTACGTTATTCAAAAACAACTTAAAAGAAGTAGAGGTAATGCTTACTTCTGAAGCAGTACTTACTGTTTCTCCTAAAATCTCAGAAGAGCGAAAAGAGATTCTGGAAAAATTGCGATTCAGGATCAGAAGTGTGCTAAAAGGGCAAAACAATCGCTATGTGCTTATGAATGTGCCTAATGAAAAGCTTAACGCTGTAGCTGAAATATTACCAGGAATGAGAAGTCCAACAGTATTACCATTAGCAGAAGAAGGATGGAGTAGTGTGCATAGTGTAATTGACAAGAATAGATTTTGGGATGTGATTGATCAGCTCAAGACGGCAGGTGCAGAAGACCCAAAAGATTGGAAAGAAATCCTGAAGCGTCCTACACAAACGGTAGAAGATATAGAAGCTACAGTTACTGATATTTTCAGAGAAGTAAAACAGAAAGGAGATATTGCAGTAGCAAAATATACTTCTATTTTTGATGGTATTTCACTAACATCAAATGTGGTTACTACTCAAGAAATAGAAGAAGCTTCTCAACAATTAGATCAAAATGTAAAAGATGCTATCGCATTAGCAAAAGATAATATAGAGAAGTTTCACAGTGCTCAAAAAACAGAACGTATTACAATAGAAACGACACCAGGCGTTTCATGTTGGCAAGAAAAGCGCCCTATACAGAAAGTTGGACTTTATATTCCAGGAGGAACAGCGCCTTTATTCTCTACGATATTAATGTTAGCTATCCCAGCTAAAATAGCAGGCTGTAAAGAAATTGTATTGTGTACACCGCCTTCAAAGGATGGCTCCGTAAATCCAGCAATAATATATGCTGCACAAGCATGTGGCGTGACTCAAATCTATAAAGTAGGAGGGATTCAAGCTATTGCTGCAATGACCTTTGGAACAGCAAGCATACCGAAAGTGTATAAGATATTTGGTCCAGGAAATCAATTTGTAACGGTGGCTAAGCAACTGGCTACAAAATACGGAGTAGCCATAGATATGCCAGCGGGTCCTTCTGAACTTCTTGTCGTTGCCGACGATACTGCAGATGCGGCTTTTGTAGCATCAGATTTATTGAGCCAGGCGGAGCACGGAACAGATAGTCAAGTGATTTTGGTATCTACATCTCGTGATTTAATTACGGCTGTAGAAAAAGAAATTCAACAGCAAATTGGTACGCTTTCGCGAAAGCGTATAGCACAAAAAGCTATAGATAATAGCAAACTAATCTATGTAGAAGATGATCGTACAGCATTGACACTTATTGATGAATATGGGCCAGAACACTTCATTATTTGTATGGAAAATGAAGATTTTTATATAGACGGAATACAAAATGCAGGTTCGGTTTTTATAGGAAATTACACACCAGAAAGCGCTGGAGATTATGCTTCTGGAACTAATCATACTTTACCAACAAACGGATATGCCAAGCAATACAGTGGTGTGAATCTGGATAGTTTTCTAAAAAGTATGACCTTTCAAAAAATTTCAAAAGAAGGAATTAAGAATATTGGTAATGCTATAGAAATTATGGCGACAGCAGAAGGGCTGGAAGCACATAAAAATGCAGTTACATTGCGATTAGAAAAAATTAATGAGTAA

Transcript

ANN32130-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5LAZ8	Histidinol dehydrogenase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=hisD PE=3 SV=1
Q64RE7	Histidinol dehydrogenase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=hisD PE=3 SV=1
Q8ABA9	Histidinol dehydrogenase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=hisD PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012135 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08029 all species →	HisG_C	HisG, C-terminal domain	Domain	Interproscan
PF00815 all species →	Histidinol_dh	Histidinol dehydrogenase	Family	Interproscan
PF01634 all species →	HisG	ATP phosphoribosyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018198 all species →	Conserved_site	ATP phosphoribosyltransferase, conserved site	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR011322 all species →	Homologous_superfamily	Nitrogen regulatory PII-like, alpha/beta	Interproscan
IPR013115 all species →	Domain	Histidine biosynthesis HisG, C-terminal	Interproscan
IPR012131 all species →	Family	Histidinol dehydrogenase	Interproscan
IPR001692 all species →	Conserved_site	Histidinol dehydrogenase, conserved site	Interproscan
IPR013820 all species →	Domain	ATP phosphoribosyltransferase, catalytic domain	Interproscan
IPR020621 all species →	Family	ATP phosphoribosyltransferase HisG, long form	Interproscan
IPR015867 all species →	Homologous_superfamily	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21256 all species →	HISTIDINOL DEHYDROGENASE HDH	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003879 all species →	Molecular Function	ATP phosphoribosyltransferase activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0000105 all species →	Biological Process	L-histidine biosynthetic process	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0004399 all species →	Molecular Function	histidinol dehydrogenase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN32130-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.