Gene detail

Detailed information of ANN32188-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:8422468...8467631
NR annotation: XP_044170175.1, uncharacterized protein LOC114967734 isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN32188-RA

ATGGCTAGCGGTGGCTATGATCGCCGGCTTCAACGACCGGACTACGACAGTATAAAAGAACAAAGTACCGAGGAAATTTACATTGAGTTCGTAGAAGTTCCACAAGATATGAAAGGTCACGTAATTGGAAGGGGTGGATATATGTTACAAGAAATCATTCAAATGTCTGGAGCAAGAATTTCCTCAGAAAGCAGGGACGAGGAAGGGTTTACAGTCTGTGGTACTGAGAACCAAATAGCAAATGCTAAGAGACTTATCTTGAAAAAAGTGAAAGAGGTACAGAGCACAATTTGGGAACGATTGGAAATTGAAGACAAATACAAGGGCTTGGTTTTGGGTAAAGGACGATCTAAACTTAAAGAAATCAGTGTCAAGACAGGGGCAAGAGTGATTTGTAAAGGTGGGGATGTCTACATTATTCTTGGGAATGAAGAGCAAAGGACTCGTGCTAAAGTACAGATTGGAAATGTAGTGTCAGGCGGAAGAATCCGGGGTGTAGAGCATGAATTCAACAAAGTGTGCTGCTACATAGATGGTTGGAGTTTCCAAGATGGTAAAATGAAGCTGAAGCAAGTGCCGCAAAAGGATCAGGCTGGATCGCATGTACGGTACCAATTGAAACCAGCGAAGGAGGATTATAAACTACAGGAATCGTTCAGTTCCGATAACCACTCTAGCTACCAGTATCAACTAATGAAGGATGTGCTAGTAACGCTGCGTAGAATAAAAAGTGATACCGGAATGCAATTTCCAAAAGCTGACATGTGGTGTCACTTTGGAACAACCACCATTTGGGTTCCCGATGAAGAGAAAGTTGAAGAGGGAGAGTGGAGCATTGATGAGGCAACACAAATGTTTGAATCGTTAAATATCAAAAATTACTGGAAACGGTCGTTCAAAGAAGGAGTTCAAGTTAACGAGGCAATCTTCAGGGGACACTACAAGGAACAAAGTCCTGAGGATGTTGCATTTATTGCAAGATACGACTTGACATTTCTAACACCATGTTGGCATCAAATAAGATGCAAGGTATGGGTTACAAATAAAAGTGCCGGGAAGTGGATCAAGGAAATACCAATTCCTTTAAATGACGTAAAGAACATCTTGGAGGAGATTGACTTTGTAGACGAAACAACAAGTTCTCGATGCCGAGGATGGCTGGTTCTGAAATCTGGGAAATACTTACAGGCAGACATTTTGTTTCCTAGTTGCGAATTTGATTGTAGATTCACCATTCGAGGGCGAACAGATAGCGCTCTAGCCAAAAACTCTCTACCAGAGGAGGAAGTTAGAAATACCTTGTTGACATATCTGTGTAGACTGACCTTGACGGAGGAGGATGAATTTGGACTGCAGCTCCCGGAAAAGGAGATGCCTGATGGATTTTATCTCATCCATAAGCGCTGGTCTAAACGAACTAAGTACATCAATGATTCAGGCTTTGCCATCATCCTCTCGAAGGAGCATACAAGGAACACCTTGATGGAGGGAGAGGAATCGAGACAATCGACTGACTTGCACCTACACTGTGAAGAGTGGGACACCTTGCTGAGCAGTGGATTCTGGGAACCAGAAGTTATAGTGAAGAAGTTGCCAGATTTTCTTAAGTTTTTAAATGAGGTCCAAGCCTTCCTATTTCGTGAGATGAAGAAAACTGAGCTGACAAGAACAGTTCCTCCAGAGATTCTTGCGCGAGGGTCTTCCGCTGTCGAGGCTTATAACAAGGCCCTTGCTGATGGAAAGACGTCTGTCAAGAGGGTGCCAATAATGCTTATTGGACAAGACCGAGCAGGAAAGACAAGCTTGAAGAAGTCATTGAAAGGTATATGCTTTGACCCAGAAGAAGACAGCACTGTGGGAATAGAGGTTGATCCTTCTCATTGTAAAGTTTCAACCGAAACGTGGAAAACAGGCGCCACAGAAAACGGCCAAAATTCTGATGTTGCACTTTCCTTTGATTATCACACAGCAAGGTGGATTGTAGACAGGTTTGAGGAGGAAAGTAAAAACCACTTGTTAGAAACATCTACGGCAGATATTGAAAATGACATGGATTCTGAAAACACTGAAATGCCAAGACAACCAAGTACAATAGAGCCCCCAATAGAGCTAGATGCAGGACATTTTCATGGATCTAGCAATCTTGACCGCCCTGTCAACACAGAGGTAGCCCCCATATCATCTAGTCCAAAAGAACAAAATAGAGAGGACATTCATCACTCCACTAGAGGTGTTCCAGAAGAGGTAGCAGCTGTAACCGAAACTCTTCTGCAAGGCGACCGAAACGACACTAGGGAAGAGATTTACTCAACCGTATGGGACTTCGCTGGACAGTCAGTTTATTACGTGACACATCCACTCTTTCTCACAGCAAGAGCAATCTACTGTCTGGTTTATGACCTCAGCCTAAATCCACAAGCTACAGCAACCCCTCTGGTAAAACAAGGAGTATACAAGAAATACCAAGAAAGCCTCAATCTGAAAACCAATTTGGATTATCTTGATTTTTGGATGAGATCTGTGGCTTCTTTAGCCGGATGTCACGTCGAGGAGAATAATGGAATTCCTAAATCAGAAGAGCTGCCAAAAAAGCTCCCTTCCATTTTCTTGGTGTGCACTCATGCCGATAAGCCGTTTGCTGATCGCAATCCTAGAGACCTAGCTTATGAGATTCTTGGTTGTCTAAGGGACAGATCGTATGGTGCCCATTTGGTTGACGTGTTCTTTGTCGATAACACGAAGGCAGGTACTGAATCCGAGTGTTCAGAGGTTATGCGGTTGCGACAAAAGGTGCTTACCGTTGCTAGGGAACTACCTCACATAAACGAAACAATTCCAATCAAGTGGTTGAAGTTTACTAAGACCATCAACGCACTTAGAGAAAAGGGAAACAAATGCATTTCCCTGAAGGACGCCAACGATATTGCATCAAACGTCTGTAACATTAACCAGGACAAAGAGTTAAAGACATTAATGGACTATTTGCATGACCTGAGATGTTTGATTCATTTTGATGACTCTCCAGAGTTGAATAAATTGGTTGTCTTGGATCCTCAGTGGCTTATTGACGTGTTCAAGAAAGTAATAACTGTACAGCCGGCCTATCAATGCACAGAGAAGAAATTCATCGAATTATGGTGGAAGCTTGAAAGGGAAGGGCTTCTGGATGAAGAACTCCTGACACATATGTGGGAACCTTTGTTTGAAAACCGAGAAACCTTTCAAAGTCTCATTGCAATCATGGAGAAATTCAGTTTGCTGTGCAGTTGGCCATCAGATTCGTCTGAGAACAAGAGGTACCTGGTTCCATCAATGTTGAGGTCGCATCCACCAGACGAGATTACTGAGCTTGTTGATTCTGCAAACATCCCGTCCCTTTTTCTTAGGTTTGGGGATGGTCAAGTCCCACCAGGTTTGTTTCCCCGATTGGTCCTGCAGTTCTTTCAGTGGGGCGAGGAAAACTTCTGGAGACCAGAAAAATCCACTTTCTTCCACAATTTTGCCAGATTTTTCCCATCAGACGATGTAGAAGTCTCCGTGATCCTTCTTTGCCACTCGTCTTCCATTGAAATTGTTGTCCACAGGGCGAATGTCGGTGATGAACTGTCCGAAGATTTCTCTTCAAGGATGGCCTTGTCGTCAGATCTCCAGTGTGACCCCACTAGGGTCACTTGCGCTGCTGTTGTTCGTAGGCAACTCGGCTTGATGTTGGAGTGCATGCGCAATGATTTGTGCTGGCTGAGGAATATGACGTATGAAATGTGTGTCATCTGTTCAGTCTGTTGTAATGGAGGTGTGGTCAACTACTGCCACACTCATCATCAACAAAGATGCAGAGAAGAGCACTGTTTACACTTCTGGCCTGTTTCCGAGTTGTGCAGGGACAAGAAGAACACACTTTGTACCAGATCTGCATCGGCTAAAAACACCAGAGTCCCGGTCATGCAGTTTTTACATTGGTTTACTCCCTCAGAAAACCAGTTAGCATTTGACAAACGCGACGGGGGATGTCCTTCTTCTGGTGGAGGAAATAAAGATAAAACACTTGCTCTGCGCAACGAGGTGCTGGAATCCCTTTTGTCCCAGCCATGTGATAGCAAACAAATTGTCTGTCAGATGAAAGAGAAGTTTCAGCTGGACCAATCCTCTTTGGAACAGCCAGACTCTGAGACCAAGTCATTGATCCGCTGCTTAGCAAGAACAGCCAAATATTCAAACAGGCTTGACGTGGTGGAACACTTAAGGGAAGTTTCACCGGCTGGAACAACTGGTCCACTGTTACCTGAAGAACTTGATGTAAGGTTCATGCCTTTTAAACAGGGAAGACAGCTTACTACTGCCTTGAGTGGGGGGGATGACTGGAAGCTGGTTGCTGAGAAACTGGGTTTGAATTCACGCGAGATTCGTTTCCTTGACAACCGCACTCTGAATCCTGCTGATGCTGTATTATCTTATATCGCAAAAGAAGGTCTAACCGTTGGAGATCTCTATGATGTCTTAAACGAGTGCGAGTTACCCGTACTGGCTGATGAAATAGCCTCTAGTGATATAAGTTTTTGCTATATATGTAAATACGGAATGGGTAACCCTCTTTTAATGAAGGTGAAGATCGAGGAGTACACCCGACTGCACCAAAGCATGGGCAGTCGTGGCTTCGATCGACGGCGATCGAACGGCGGAAAGGAACGATCAGCTTATACCCGCCTTAAGAAACAGCCTAAAGAACCATTGGAGTGTGAACGTGTTGAGGTATCGAGGGATTTAAAGGGGCACGTAATCGGAAGGGGAGGATGTTTGATTAAAGAAATTATGAAGTCTTCCGGAGCGTTAATCAGTTCGCCGAGGAAAGACGATGGTTGGTTTACAGTCAGCGGTAATGCCGAGCAACGAGCATGCGCCAGGAGGCTTATTTTAGGAAAAGTGCAGGAAATCCAGAGTAGGACTAGCGAAAGACCTCCACTCGGCGAGCTGATTGAGATAGCAGATGAATACAAGGGTTTGGTGATGGGGAAAGGGGGCGATAATCTCAGAAATATAAGCACTCAGACAGGAGCAAAGGTGGTTCGGAAACAAGGCGAGGTGTACATAGCCAGTGGAACAGAGGAGCAGAGGCAACAGGCAAAAGTGGTTATTAAAATTATTATTGCTGGGGCTAGACTCCGAGGTATGCAAAACGAATTTAATAAAGCCTGTTGCTACATCGATGACTGGAATCTGCCTCCGGACTGTGAACTCAAGCTGGAGCAAGCAGTGCAAGGTGATCGGATGGTACTTCCAGGATCAACTACACAGTACCGGCTAAAGCCAGCAGAAGATTATGGACTGCAGGAATCTTGCTGTCCAGATGAGGATCCAAGCTATCTGGAAAAACTTGTCAATGACGCTTTGGAAGCGCTCCGTAAGATTAAACTTGAAACGAGGACGAAAGAATACCTCAAAGCTGACATGTGGTGTCACTTTGGAACGGCCATCATCAGAGGACCTGACGAAGAGGAAGCCGATGAAGGTGAATGGACCATTGCTCAGGCAACAGAAATGTTCCAAGCATCAAATGAAGGGCTTCACTGGAGAGCTGCATTCAAGGAAGGAGTCAATTTGGACAAGACATTTCTGGAAGGAAGTGACTGCGAAAATACTCCTGAGGAATATTTAGATTACGTAGCAAGATACGACTTAGGATTTTTAACACCATGTGGTCATCAGATAAGATTCAAGGTGTGGGTAACAAAGAAGAACGTCGACAAAAAGCTGGAGGACATTCCAATTCCTTTCAGCGACGTAAAGAACATATTGGATGAGGTACACTTTGAAGATGAATTGACGCGGTCACGATGCCGTGGATGGCTAGTTCTACCATCCAGAAGATATCTGCAGGCGGACATTTTGTTTCCTGGTTGTGAATTTGATTGCAGACTCACCATCCGTGGACGAACGGATAGTGCCCTGGTAACGGACTACGTACCGAAAGAAGAAGCAAGACAAGCCTTGTCAAGATACTTGTCTGAATTTATTTTGATTAATGAAGATAGCCTTGAACTCTGTCCGCCAGAGATGAATATACCAGAGGAGGAGAACAGAACATCGACTGACCTCCATCTGCACTGTAGAGAGTGGGACGAGTTGCTCAGCAGTGGAGACTGGGAACCGGAAGTAATTGCTGAAAAGATTCCCGAGTTTTTGCGATATGGCCTTGAGCCATGCCTTAACATGCTTGAGTACCCAGTCGCTATTTGCGTGTTTTGTGCGCAAGCCTTCTGCAGTTCAAATGTGCTATACGATGTGGAACAAAGGCATGGTCTACAAGAAACCTTTATCTACTCTTCGCGTTGGTCCTACCGCCGAATAAATGGAACTGGGCTTCGAACATCGCGAACTTCGCTAATTCAGCTCCTGCTTCTCCTATCAGGCGATATTGAAACTTGCCCTGGACCGATCGACAGATGTGGCTCGTGCTCAAAAGCTTTGAAGAAAAACCAAAGCAGGATGTGTTGCTCGCAATGTCATTTGAAGTTTCACCTAAAATGCTTCTGCTCCGATGGTAGTGGAGTTATCTGCAGTTCTTGTCTTTTTAACAACAACATTCAAGATGGAGCCGACCACCATCAACAAGAAGGTGTTCATCCATATGACATCCCCGAACTTAGCGAGCTTGTCTCTAAAAAGGGCCTTAAAATTCTCAATCAAAACATTAGAGGTTTGTTAGCAAACAAAAGTATCATCTGCCAAATCCTGGATGGCTTTAAGAATATACACATCTTTTTGGTCAGCGAAACACATTTATCCCTCGAAAGTGAAGCCGAGGTCCATATTGAAGGTTACACATTTATTGCAAAGTCAAGGGCTTCTGGTCAAGGTGGAGGTGTTGGTGTTTACATTTCTTCATCTATTCCATTTCAAAGACGAATGGATCTCGAACAAGAGGACATTGAATGCATCTGGATTGAGATATTATTTCCCAAAACTAAAGGTTTTCTAGTTGGAATTATTTACCGCCCTCCGGATTCTTCTAAACATCTCTGCAAAAATTTCAATTGCAAACTTGAATCAATGCTTTCGACAGTGTCAGCTGAAAACAAAGAATGTATTCTCTCAGGTGACATTAACTGTAACTATTTGGTGCCCTCTGATCACAAAGAAATTAAAACCATTCTCAACTCCTTTGGCCTGAAACAACTCATCACTAGCCCCACGAGAATTACGTGTGAGTCCAAGACACTAATTGACGTTATTTGCAGCAACGAACCTCATAACATCTATTCGGTTAAAGTAATCCCAGCTGGCCTGAGCGATCATGAACTTATTGGATGTGCTCGGAAGCTGCACAATGTTAAGTTCAATCCGCGAATCATTACTTGCCGTAATTTTGCTACCTACGACCCTAAGCTATTTTGCGAAGAGTTAAATTCTGTGAATTTTGAAGACGTTTATTCATCTATCTCCGTAAATAAAGCGTGGGCCTCTTTTCGAGACATTCTGCAACGATGTATTGACAAGCATGCTCCACTTATTTCAAAGAAGGCAGACTCTGTCCTTGGTTGA

Transcript

ANN32188-RA

Protein

ANN32188-RA

MASGGYDRRLQRPDYDSIKEQSTEEIYIEFVEVPQDMKGHVIGRGGYMLQEIIQMSGARISSESRDEEGFTVCGTENQIANAKRLILKKVKEVQSTIWERLEIEDKYKGLVLGKGRSKLKEISVKTGARVICKGGDVYIILGNEEQRTRAKVQIGNVVSGGRIRGVEHEFNKVCCYIDGWSFQDGKMKLKQVPQKDQAGSHVRYQLKPAKEDYKLQESFSSDNHSSYQYQLMKDVLVTLRRIKSDTGMQFPKADMWCHFGTTTIWVPDEEKVEEGEWSIDEATQMFESLNIKNYWKRSFKEGVQVNEAIFRGHYKEQSPEDVAFIARYDLTFLTPCWHQIRCKVWVTNKSAGKWIKEIPIPLNDVKNILEEIDFVDETTSSRCRGWLVLKSGKYLQADILFPSCEFDCRFTIRGRTDSALAKNSLPEEEVRNTLLTYLCRLTLTEEDEFGLQLPEKEMPDGFYLIHKRWSKRTKYINDSGFAIILSKEHTRNTLMEGEESRQSTDLHLHCEEWDTLLSSGFWEPEVIVKKLPDFLKFLNEVQAFLFREMKKTELTRTVPPEILARGSSAVEAYNKALADGKTSVKRVPIMLIGQDRAGKTSLKKSLKGICFDPEEDSTVGIEVDPSHCKVSTETWKTGATENGQNSDVALSFDYHTARWIVDRFEEESKNHLLETSTADIENDMDSENTEMPRQPSTIEPPIELDAGHFHGSSNLDRPVNTEVAPISSSPKEQNREDIHHSTRGVPEEVAAVTETLLQGDRNDTREEIYSTVWDFAGQSVYYVTHPLFLTARAIYCLVYDLSLNPQATATPLVKQGVYKKYQESLNLKTNLDYLDFWMRSVASLAGCHVEENNGIPKSEELPKKLPSIFLVCTHADKPFADRNPRDLAYEILGCLRDRSYGAHLVDVFFVDNTKAGTESECSEVMRLRQKVLTVARELPHINETIPIKWLKFTKTINALREKGNKCISLKDANDIASNVCNINQDKELKTLMDYLHDLRCLIHFDDSPELNKLVVLDPQWLIDVFKKVITVQPAYQCTEKKFIELWWKLEREGLLDEELLTHMWEPLFENRETFQSLIAIMEKFSLLCSWPSDSSENKRYLVPSMLRSHPPDEITELVDSANIPSLFLRFGDGQVPPGLFPRLVLQFFQWGEENFWRPEKSTFFHNFARFFPSDDVEVSVILLCHSSSIEIVVHRANVGDELSEDFSSRMALSSDLQCDPTRVTCAAVVRRQLGLMLECMRNDLCWLRNMTYEMCVICSVCCNGGVVNYCHTHHQQRCREEHCLHFWPVSELCRDKKNTLCTRSASAKNTRVPVMQFLHWFTPSENQLAFDKRDGGCPSSGGGNKDKTLALRNEVLESLLSQPCDSKQIVCQMKEKFQLDQSSLEQPDSETKSLIRCLARTAKYSNRLDVVEHLREVSPAGTTGPLLPEELDVRFMPFKQGRQLTTALSGGDDWKLVAEKLGLNSREIRFLDNRTLNPADAVLSYIAKEGLTVGDLYDVLNECELPVLADEIASSDISFCYICKYGMGNPLLMKVKIEEYTRLHQSMGSRGFDRRRSNGGKERSAYTRLKKQPKEPLECERVEVSRDLKGHVIGRGGCLIKEIMKSSGALISSPRKDDGWFTVSGNAEQRACARRLILGKVQEIQSRTSERPPLGELIEIADEYKGLVMGKGGDNLRNISTQTGAKVVRKQGEVYIASGTEEQRQQAKVVIKIIIAGARLRGMQNEFNKACCYIDDWNLPPDCELKLEQAVQGDRMVLPGSTTQYRLKPAEDYGLQESCCPDEDPSYLEKLVNDALEALRKIKLETRTKEYLKADMWCHFGTAIIRGPDEEEADEGEWTIAQATEMFQASNEGLHWRAAFKEGVNLDKTFLEGSDCENTPEEYLDYVARYDLGFLTPCGHQIRFKVWVTKKNVDKKLEDIPIPFSDVKNILDEVHFEDELTRSRCRGWLVLPSRRYLQADILFPGCEFDCRLTIRGRTDSALVTDYVPKEEARQALSRYLSEFILINEDSLELCPPEMNIPEEENRTSTDLHLHCREWDELLSSGDWEPEVIAEKIPEFLRYGLEPCLNMLEYPVAICVFCAQAFCSSNVLYDVEQRHGLQETFIYSSRWSYRRINGTGLRTSRTSLIQLLLLLSGDIETCPGPIDRCGSCSKALKKNQSRMCCSQCHLKFHLKCFCSDGSGVICSSCLFNNNIQDGADHHQQEGVHPYDIPELSELVSKKGLKILNQNIRGLLANKSIICQILDGFKNIHIFLVSETHLSLESEAEVHIEGYTFIAKSRASGQGGGVGVYISSSIPFQRRMDLEQEDIECIWIEILFPKTKGFLVGIIYRPPDSSKHLCKNFNCKLESMLSTVSAENKECILSGDINCNYLVPSDHKEIKTILNSFGLKQLITSPTRITCESKTLIDVICSNEPHNIYSVKVIPAGLSDHELIGCARKLHNVKFNPRIITCRNFATYDPKLFCEELNSVNFEDVYSSISVNKAWASFRDILQRCIDKHAPLISKKADSVLG

Uniprot

Uniprot term	Description
Q55E58	Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
Q8SSS9	Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2
Q54WS5	Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum OX=44689 GN=roco6 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF00013	KH_1	KH domain	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR004088	Domain	K Homology domain, type 1	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR004087	Domain	K Homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan