Detailed information of ANN32204-RA in Montipora grisea

Genomic Location: Scaffold_6576__1_contigs__length_26697:19895...22399
NR annotation: KRX03521.1, hypothetical protein PPERSA_02900 [Pseudocohnilembus persalinus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86H36DNA-directed RNA polymerase I subunit rpa1 OS=Dictyostelium discoideum OX=44689 GN=polr1a PE=3 SV=1
P15398DNA-directed RNA polymerase I subunit rpa1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpa1 PE=1 SV=2
P10964DNA-directed RNA polymerase I subunit RPA190 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPA190 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR015699DomainDNA-directed RNA pol I, largest subunit, N-terminal domainInterproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan

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