Detailed information of ANN32206-RA in Montipora grisea

Genomic Location: Scaffold_6576__1_contigs__length_26697:22844...24210
NR annotation: KRX03521.1, hypothetical protein PPERSA_02900 [Pseudocohnilembus persalinus]
Species abbreviation MGRIS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9SVY0DNA-directed RNA polymerase I subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPA1 PE=3 SV=1
O95602DNA-directed RNA polymerase I subunit RPA1 OS=Homo sapiens OX=9606 GN=POLR1A PE=1 SV=2
O54889DNA-directed RNA polymerase I subunit RPA1 OS=Rattus norvegicus OX=10116 GN=Polr1a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005025 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04997
all species →
RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045867
all species →
FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR044893
all species →
Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR007080
all species →
DomainRNA polymerase Rpb1, domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376
all species →
DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001054
all species →
Molecular FunctionRNA polymerase I activityInterproscan
GO:0003899
all species →
Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005736
all species →
Cellular ComponentRNA polymerase I complexInterproscan
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN32206-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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