Detailed information of ANN32271-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:10795421...10796503
NR annotation: CAH3121894.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8L840ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1
Q9FT70ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana OX=3702 GN=RECQL4B PE=2 SV=1
Q9FT72ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF09382RQCRQC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR018982DomainRQC domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03654recQ; ATP-dependent DNA helicase RecQEC:5.6.2.4
DNA repair and recombination proteinsko03400deepkoala

TOP