Gene detail

Detailed information of ANN32284-RA in Montipora grisea

Genomic Location: Scaffold_480__1_contigs__length_92853:80070...82111
NR annotation: MXV74018.1, histone deacetylase [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O30107	Probable deacetylase AF_0130 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=AF_0130 PE=3 SV=1
Q2QWU2	Histone deacetylase 10, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC10 PE=1 SV=1
P72702	Uncharacterized protein slr0245 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=slr0245 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00850	Hist_deacetyl	Histone deacetylase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050284	Family	Histone deacetylase and polyamine deacetylase	Interproscan
IPR000286	Family	Histone deacetylase family	Interproscan
IPR023801	Domain	Histone deacetylase domain	Interproscan
IPR037138	Homologous_superfamily	Histone deacetylase domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR023696	Homologous_superfamily	Ureohydrolase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10625	HISTONE DEACETYLASE HDAC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004407	Molecular Function	histone deacetylase activity	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016575	Biological Process	obsolete histone deacetylation	Interproscan