Detailed information of ANN32305-RA in Montipora grisea

Genomic Location: Scaffold_4170__1_contigs__length_33139:8730...13060
NR annotation: CAE7932356.1, carB [Symbiodinium necroappetens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P38100Carbamoyl phosphate synthase large chain OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=carB PE=3 SV=3
Q87WP4Carbamoyl phosphate synthase large chain OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=carB PE=3 SV=1
Q8RSS3Carbamoyl phosphate synthase large chain OS=Halomonas eurihalina OX=42566 GN=carB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00988CPSase_sm_chainCarbamoyl-phosphate synthase small chain, CPSase domainDomainInterproscan
PF02787CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF02142MGSMGS-like domainDomainInterproscan
PF02786CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF00117GATaseGlutamine amidotransferase class-IDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036914Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR005479DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR006275FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR011607DomainMethylglyoxal synthase-like domainInterproscan
IPR002474DomainCarbamoyl-phosphate synthase small subunit, N-terminal domainInterproscan
IPR005480DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR016185Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR036480Homologous_superfamilyCarbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyInterproscan
IPR036897Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR006274FamilyCarbamoyl-phosphate synthase, small subunitInterproscan
IPR035686DomainCarbamoyl-phosphate synthase small subunit, GATase1 domainInterproscan
IPR033937DomainCarbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domainInterproscan
IPR029062Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR005483DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR017926DomainGlutamine amidotransferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0004088Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006541Biological Processglutamine metabolic processInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01955carB, CPA2; carbamoyl-phosphate synthase large subunitEC:6.3.5.5
Alanine, aspartate and glutamate metabolismko00250deepkoala

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