Detailed information of ANN32333-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:13167639...13168268
NR annotation: XP_029213088.2, POU domain, class 3, transcription factor 3-like [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q812B1POU domain, class 3, transcription factor 4 OS=Mesocricetus auratus OX=10036 GN=Pou3f4 PE=2 SV=1
P62515POU domain, class 3, transcription factor 4 OS=Mus musculus OX=10090 GN=Pou3f4 PE=2 SV=1
P62516POU domain, class 3, transcription factor 4 OS=Rattus norvegicus OX=10116 GN=Pou3f4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001851 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan
PF00157
all species →		PouPou domain - N-terminal to homeobox domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010982
all species →		Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR013847
all species →		DomainPOU domainInterproscan
IPR000327
all species →		DomainPOU-specific domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR050255
all species →		FamilyPOU domain transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11636
all species →		POU DOMAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN32333-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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