Gene detail

Detailed information of ANN32466-RA in Montipora grisea

Genomic Location: Scaffold_8312__1_contigs__length_22851:11824...15987
NR annotation: MCP4082538.1, 2-oxoglutarate dehydrogenase E1 component [Planctomycetaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN32466-RA

ATGATGGTTCAGTGTCAGTGCGGTCAAAAGTACAACATCAAGGAATCCTTGTACGGGAAAGTGGTGCGCTGTCGGAAATGTGGTAACAACATGCAGGTGGGGTACCCGCAACAACAGGTTGCCATTGAACCGCTACCCAGTCAGCAAGCCCCAGCCCAACCGCAGATAACCCACGAGCAGCCCGCACATCAACAGCCCACGTACGGACAACCGACGTACGGACAACCCACCTACGAACAGCCAACCCCTCAACAGCCGGTTTACGACCCGCCTCCTCAGCCGCAGCAGCCCGCCTACGATCCGAATGCCTATGGAGGGATGTCGGACAGTCAAATGTCGATGGGCCCTTCGCCCTATGCACCTCAATATCCAGCTCGACCAGCGCCAGGAAAGCGTCCTCGAACAAAACAGATCCGCTATGACTTTTCCAAGGTCAACTTGGGACTGCGGCTGATCTTTGGTGGAACCTTGGCATCAATCCTGTGTATGTTTGCCGTTTTGGGATTCGCCTTCGCGGGCGTGCCGTTCCTCGCTTTGCTAATGATCTTGGGCGCGAAGGTCGCCGAGTTCGTCGACAATCCAGGCGCCGCCCATGATGCCCACTCCCTGCTGGTCTTCTACTGGATCGTCATGGGAATCTGCTTTGGCTTCGCCATCCTGCTCATCGTCTTCGCGATTGCCCTGCCTCCGATAGCTGTGGGAATCATCATGATTGTGGGTGGAATTGGAATGTTGGTGACCTGGATCATCTGGTTCGTCCATTTCATGGCGTTCATCAACGACCTGGAATTCAAAAAGCGTTCAGCGGGTCGACGAAAACCCCGCCGCTGTCACGACTACGTTGAAGCTCTCTACGAACAGTATCAAAAAGATCCATCCAGCCTTTCGGAAGACTGGCGTAAGTACTTTGATTCTTTTGATTCCGAATCCATTGAACCGGCGACCGGAATCGGTTCGGCAGCCACGCGCGGCGCCGAAACGCTGGCTCAACTGCAAGACCGAGTAGACCAATTGGTTCGCGGGTTTCGAGTTCGCGGGCACCTGGAAGCCAAAATCGATCCGCTAGGCATTCCCCGTCCGACCAACCGCGAGTTGAACCTGGAAGCGTACTCCATGTTGCCAGGCGACCTGGACAAGACGTTTTCGGCGCGAACCATCCAAGGCGAAGACTTTTTGACTCTTCGCGAAATCATTGAGCGACTTCGCAACACTTACTGCCGCAGCATCGGTGCCCAGTTTATGCACATCGACGATCACGCTGTACGCAGCTGGTTACAAAAGCGTATGGAGGGATCGCAAAACCGAATTCAACTCAGTCGAGAAACTCAGCTTCGCATCCTGACTCGTTTGACAGATGCCACCATCCTAGAACAGTTCATGCGAAAAAAGTTCCTCGGTGCAAAAACGTTTTCCCTGGAAGGTGGCGAGACACTGATTCCACTGCTTGATTTGGCCTTGGACAAAGCTGCCAAGCAGGGAACCGTTGAAGTTGTACTAGGTATGGCGCACCGGGGCCGCCTGAATGTGCTGGCCAATATCATGGGCAAACGCGCCGAGAATATTTTCTGGTCGTTTGACGATCCCGATCCCGAAGAAAGTCGCGGCGGTGGCGACGTGCTTTATCACTTGGGGCACAGTAGTGACTGGAAAAACTCCACTGGTCAGAACATGCACATTTCCCTGTGCTTCAATCCTAGCCACCTGGAGTTCGTCAACGTGGTGGCGATGGGACGCTGTCGGGCCAAGCAGGACCGGATTGCGGATCACGACCACAAGAAGGTATTCACCATCCTGATCCACGGTGACGCTGCGTTTGCCGGCGAGGGCATTGTTCAGGAAACGCTAAACCTCAGCCAACTTCCAGGCTACAAGGTGGGCGGAACGTTGCATATCATTCTCAACAATCAGGTAGGGTTTACGACGGTCGCCGGTGAAGGCCGTAGCACCACCTATGCGAGCGACGTGGCAAAGATGCTGCAGATTCCAATCTTCCACGTCAATGGAGAAGACCCGGAAGCGGTTGCCCAAGTCGTCGAGTTGGCGATGGATTTCCGCGAGCGATTCCAGCGTGATGTCGTTATTGACATGTATTGCTTCCGTCGACTGGGGCACAACGAAAGTGACGAACCTCGTTTTACTCAACCGATCATGTACAAAACGATCGATGCTCGAAAGACAATTCGGGAAAGCTACCTCGATCACCTCTCGACAATGGGAGAAGTGACTCGAGAAGAAGGCGATGCCATCGCCGAGCGACGCCAGGAAACTTTGCAGAAAGAATTTGAATCAGCCCGGAAGAAAACTTACCAACCCGATACGCAAACATTAGGAGGCTATTGGAAAGGCTACTACGGCGGATTCGAACGCGATGACGACCATATCGACACTGGCGTCGCTATGGGACAATTGACTTACACATTGTCGCAATTGACTGAGTTCCCGGAGGGCTTCAACCTTCACAAGCGTCTAAAACGTGTTTTTGAAAAGCGGCATGAAATGGCCGATGGGTCGAATAAGATCGACTGGGCCAGTGCTGAACTGGCAGCCTTCGGAACACTTTGCCTGGAAGGCCACCCCGTTCGCTTGACTGGACAGGACTGTCAACGAGGCACTTTCAGCCAACGTCATGCTGTTCTACACGATTCGGAAACTGGCCAGATCTATTCACCCATCAAACATCTCGCTGATGATCAGGCCGAAGTCATCATTTGCAACAGCCCGCTTAGTGAAACAGGTGTCCTCGGATTTGAATATGGATACAGCCTGGATCGCCCCGAGTCGCTGGTGATGTGGGAGGCCCAGTTCGGTGATTTCTACAACGTCGCGCAGGTGATCGTGGACCAATTCATCACTAGCGCCGAAGACAAATGGCGTCGGCTTAGCGGATTGGTCATGTTGTTACCGCATGGCTTTGAAGGGGCCGGACCAGAACACTGCAGTGCCCGGGTCGAACGCTTCTTGACTCAAACAGCCGAGCACAACTTCCAAATCGCTTGCCCCACGACTTCGGCCAACTATTTTCACCTGTTGCGTCGCCAAGTGAAACGAAAATGGAGAAAGCCGCTGGTCGTTCTCACGCCCAAAAGCTTGTTGCGTGAACCTTTGGTGTCGTGTGGGTTGGAAGAGTTCACCAGTGGTTCATTTCAGGGCGTTTTACCCGATCCGCTACGCGACAAGATCTCCAAACCGCGGAAAATTATTCTTTGCACAGGGAAGATTGGCGTCGACTTGTTGAAAGAACGTGATACTCACGACGTCGACGAGGTGGCTATTGTCCGACTAGAGCAGCTTTACCCGTTGCCCCTTGCGGAATTGGAACGAGTTTTATCGGATTACCCCGAAGGAACACCAGTCACCTGGGTGCAGGAAGAACCGCTGAATATGGGTGCCTGCAACTTTATCCGTATCAACTTCGGTACGTCCTTCTTTGGCCGGTGGCCGTTCGCCGGCGTCTGCACCCGCCCCGAATCGGCAAGCCCCTCAACGGGATCCAAGAAAGCTCACAAGATCGAACACGAAGAATTGATCAATGCCGCATTGACGACGAAAGGCCTGCCGAAGCTTAACGCTCACAAGGCCAAAGTTTAG

Transcript

ANN32466-RA

Protein

Uniprot

Uniprot term	Description
Q72PJ7	2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=sucA PE=3 SV=1
Q8F6S7	2-oxoglutarate dehydrogenase E1 component OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=sucA PE=3 SV=1
A5VSQ0	2-oxoglutarate dehydrogenase E1 component OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=sucA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16870	OxoGdeHyase_C	2-oxoglutarate dehydrogenase C-terminal	Family	Interproscan
PF16078	2-oxogl_dehyd_N	2-oxoglutarate dehydrogenase N-terminus	Family	Interproscan
PF02779	Transket_pyr	Transketolase, pyrimidine binding domain	Domain	Interproscan
PF00676	E1_dh	Dehydrogenase E1 component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031717	Domain	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR032106	Domain	2-oxoglutarate dehydrogenase E1 component, N-terminal domain	Interproscan
IPR011603	Family	2-oxoglutarate dehydrogenase E1 component	Interproscan
IPR005475	Domain	Transketolase-like, pyrimidine-binding domain	Interproscan
IPR042179	Homologous_superfamily	Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily	Interproscan
IPR001017	Domain	Dehydrogenase, E1 component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23152	2-OXOGLUTARATE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004591	Molecular Function	oxoglutarate dehydrogenase (succinyl-transferring) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0016624	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0045252	Cellular Component	oxoglutarate dehydrogenase complex	Interproscan