Gene detail

Detailed information of ANN32475-RA in Montipora grisea

Genomic Location: Scaffold_4539__1_contigs__length_31932:29466...31867
NR annotation: NWJ90779.1, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase [Marine Group I thaumarchaeote]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN32475-RA

ATGACAGCATTTTTCTTGATTCAAAAAGTAAAATGGGATGTGAGACGTGTCATTTTGTCTGGTGAAGAGCCTGCATTGAGCAAACACCTTGCAAAACGTAACCAAGATGGTGTTGCCATGAATCTTAATATTTTGGGAGAAATGGTATTAGGAGAGCGTGAAGCACAGAACCGTTTAAATGATTTGTTAAAAGCTCTGGAAAGACCTGATGTAGATTACATCTCTATCAAAATTTCAGGAATTTTTTCTCAAATCCATCCGCTGGGATATGAAGAATCTAAAGAAGCACTGAAAAAACGTCTGGCACAACTCTATCGTCAAGCTCAAAAATATCCTTCACAACAGACAGGTCTGGCAAAGTTTATCAATTTGGATATGGAAGAATACCATGATACTGAATTGACACTTGATGTTTTTAAAGAAACATTAGCACAAGAAGAATTTCATCAGCTTTCTGCAGGAATTGTGCTACAAGCGTACTTGCCTGATTCATGGATATATCAAAAAGAATTGATTGATTGGGCAAAAAAACGTCTGAAGAATGGAGGAGCAGCAATCAAAGTGCGTTTAGTCAAAGGAGCTAATTTACAGATGGAGCAGGTAGAATCTTCTATACACGGCTGGGAATGCCCCGTGGTCAGGCAAAAAGTGGAAGCTGATGCTAATTACAAACGTATGTTAGAAACAGGAATCTGCAAAGAAAATATTCAAGCTGCAAATTTAGGTGTGGCGTCCCATAATCTTTTTGATCTTGCTTATGCCTCTGTTCTTGCTGACCGAGAGCAGGTTTGGAAATACTTTACTTTTGAGATGCTAGAAGGCATGGCAGAGTCACTTTGGAAAACTTTGCATGCAGAGTCTAAACCTGTTTTGCTTTATGTGCCTGTTGCCACATCAAAACATTTTCTAAATGCTATTGCCTACCTTGTCAGAAGACTTGATGAAAATACTGCCCCTGATAACTTTCTAACTCATTCCTTCGGTTTACGTTTTCCAAGTGCAGAATGGAATTTTCTCAAATCACAATTTTTAGAATCTTGTCAGGTCAAACACACGCTCACAGATCAACCATACCGAAAACAAAATAGACAAATAGAAGAAGCACTTTTGATTCCACCCCATGAGCCTTTTCAAAATGAACCCGATACAGATTGGTATCTTCCTCAAAATCGGATTTGGGCTGAAGCCATTCGCCAAAAATGGCAAAACCATGAGCTGATTCATGTGCCTATTCAGATTGGTACAAAGCAAGTTCAGGGGCAATCTTATCGGGATTTTCATGACCCCAATACTGATGAACAACGATGCGTGTATCGTGTATCACTTTCTGATGAACAACATGTTCTTGATGCCTTGCAAATTGCTGAAGATGATCCAAGTCAATGGAGCCAAACTACAACAGAGCAACGGTGTCAAATTTTAAGCTCTGTTGCACAAAAATTTCGCCAAAAACGAGGTGAACTGATTGGTTGCATGGCAGCAGTCACAGGAAAAGTCTTTTTAGAATCTGACTCTGAGATTTCAGAAGCAATTGATTTTGCAGAATATTACCCTAGAACCTTTAAGAATTTTGAAGAAACCTTATCCCATGTCAATCTTTTACCTAAAGGTATCATTTTAGTCATTGCTCCTTGGAACTTTCCTATGGCTATTCCTGCTGGTGGAGTGCTTTCCGCTCTGTCATGTGGGAATCGTGTTTTGTTAAAGCCTGCTCCTGAAGCCTTTCCAATCGCATGGGAATTTGCACAATGTTTTTGGAATGCAGGAGTCCCCAAAGAAGCCTTTCAACTGGTATGTTGTGAGGAAGGTGCAGTGTTGGATGCACTTGTTGGACATTCTGGTATCAAGCATATTCTTTTTACTGGTGGAACAGAAACTGCTTTGAAAATTTTGGAAAAACGTCCAGACATTCCTTTGTCTGCTGAAACAGGAGGAAAAAATGCAACCATCATTTCTACAACTGCTGATTTAGACCAAGCAGTGAAAGATGTTGTCCACTCTGCATTTTCTAATGCAGGTCAAAAATGTTCTTGTACCTCATTACTGATTGTAGAAAAAGATGTTTTTGATGAACCTCTCTTTGCAGAAAAATTAAAAGATGCAGCTGAAAGTTTTAAGATTGGTTCTGCATGGGATTTATCTTCTGATGCAGGCCCAATGATTCATTGTCCAAATCCACTTCAAAAAAGAGAATTGACACAAGGTGAGCAATGGCTTGTTCAGTCAAAACCATTGAGTCAGAAAATCTACTCTCCTGCAGTGCGTTGGAATACCCCTCCGCAGTCTTTTGCACATCAAGTTGAATTTTTTGCTCCTATTTTGTCAGTCATTCGTGCTGAAAGTTTGGAACATGCAATACAACTTGCAAATGCAACACAGTATGGTCTCACTGCA

Transcript

ANN32475-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C5D4J5	1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rocA PE=3 SV=1
A4IJP9	1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=rocA PE=3 SV=1
Q5L3K8	1-pyrroline-5-carboxylate dehydrogenase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rocA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0059441 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01619 all species →	Pro_dh	Proline dehydrogenase	Family	Interproscan
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002872 all species →	Domain	Proline dehydrogenase domain	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR050485 all species →	Family	Proline metabolism enzyme	Interproscan
IPR029510 all species →	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR029041 all species →	Homologous_superfamily	FAD-linked oxidoreductase-like	Interproscan
IPR016163 all species →	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR025703 all species →	Family	Bifunctional protein PutA	Interproscan
IPR016160 all species →	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42862 all species →	DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 1, ISOFORM A-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003842 all species →	Molecular Function	1-pyrroline-5-carboxylate dehydrogenase activity	Interproscan
GO:0009898 all species →	Cellular Component	cytoplasmic side of plasma membrane	Interproscan
GO:0010133 all species →	Biological Process	proline catabolic process to glutamate	Interproscan
GO:0016620 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0004657 all species →	Molecular Function	proline dehydrogenase activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN32475-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.