Gene detail

Detailed information of ANN32543-RA in Montipora grisea

Genomic Location: Scaffold_1145__1_contigs__length_61047:8730...11309
NR annotation: MCL5436381.1, ATP-dependent zinc metalloprotease FtsH [Candidatus Dependentiae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN32543-RA

ATGTTGCTTTTTGTGGCACTGTTTGTTGTCAGCATTGTTTTGCTGAGCCGATTGGCAGAGCATTCTCGAACAACTGAGGCATTAAGCTACTCTCAGTTTTTAAAACAGGTTGAGCAGGGACTGGTTAAGTCGGTACGAGTTTCTGGTACTGATGTAACAGGTTGGTATAAAAATGGCCATCGTTTTGAAGCAGTTATTGCAAATAATCCACAAAACTGGGATCTTTTGCGTAAGTATGATGTTGAGTTTTCAGTTGGGGACTCAGCAAGTGCCTTTAGCATGTGGTATTTCTTTTTATTTGGTATTTTTGCTGTACTCATGGCGGTGTTTTGGTTTATGTCCCGTCAGTCTCGTGGTGGTGGCGGTGGTGCCAGTACGCTTTTTTCGATGGGTAAAAGTAAGGCTCGGATGTTTTTGCCTTCGCAGATAAAAGTTTCTTTTAAAGATGTTGCTGGAGCAAATGAAGCCAAAGAAGAGCTACAAGATATTGTCGATTTTCTTAAAAATCCAAAAAAATATGAAAAAATTGGTGCTGAGCTTACCCGTGGAGTGCTTTTAGTTGGTGAACCAGGTAACGGTAAAACGCTCTTAGCAAAAGCTGTTGCTGGAGAGGCGAATTGCCCCTTCTTTAGTATCACAGGCTCAGACTTTATCGAAGTATTTGTTGGTGTGGGTGCATCTCGTATCCGTGACCTATTTGCCCAGGCGCGTAAGAAATCACCATGTATCATTTTTATTGATGAAATCGATGCAATTGGGCGTCGTCGTGGTAGTGGTCTTGGTGGTGGTCATGACGAGCGTGAGCAGACATTAAATCAGCTACTTACAGAGATGGACGGCTTTGCATCATCAGATTTACCGGTTGTTGTGATTGCAGCAACGAATATGCCCGGTGTGTTGGATCGCGCATTGCTGCGTCCAGGTCGCTTTGATCGTCGTGTGACAGTTCCGTTTCCTGATGCTGATGCACGTCGTCAGATTATTGAAATCAACTCGAAAAAAATTAAAATTGATCCAGAAGTTAATTTGCAGGCGATTATCGATAAAAGTGCAGGATTCAGTGGTGCTGATTTGGCAAACTGTGTCAATCAGGCTGCAATCAATGCAACCAAGAGTGATCGTACCTTTGTAATACAAGAAGATTTTGATATTGCTTTCAAAAAGCTGATGGAGTCGCATAAAGCGAGCCATAGTGAACATAAAGCTTCAGGTACCGAACAGGGCACTGCACGTATGTATATGCCGTCACAAATCAAAGTTCGTTTTGAAGATGTTGCAGGGCTACAAGAAGTTAAAGAAGAGCTAATTGATTTTGTTGACTATCTTAAGAATCCAGAAAAATATAAAAAAATTGGTGCTAAATTGACCCGTGGTGTTCTGCTTGCTGGTGATCCAGGTAATGGTAAAACCTTACTGGCTCGTGCAGTTGCAGGTGAAGCGGGCCGTCCGTTTTTTAGTGCGAGTGGTTCTGAATTTATCGAAAAGTATGTTGGCGTTGGTGCAGCGCGTATTCGTGATCTTTTTGCTCAAGCACGTCGCCATTCACCAAGTATTTTATTTATCGATGAAATTGATGCAATTGGTGCACAAAGAAGCTCAGAAAACCAAGAGCATGGTCAGACTTTGAATCAACTCCTTACAGAAATGGATGGATTTGATGATGAAGGTACACAGGTGATTGTATTGGCAGCAACAAACAGACCTGATATGCTCGATAATGCATTAACACGTGCTGGTCGCTTTGACCGTCGCGTTGATGTACCATATCCAGATCTTAAAAGCAGGCGTGCAATTTTGGATGTCCATACAAAGAATATTCAGGTTGATACTAGTGTTGATCTAGACAAGGTTGCTCGTGGTACGCCAGGATTTAGTGGTGCAGATGTTGCAAATCTTGTCAATGAGGCGGCACTCAATGCTGTTAAGCATGATCGTGAGACAGCTCAGGTGGATGACTTTGAAGAAGCACGTGACAAAATTATGATGGGTAAAGAGAGTCGCTCTATGGTGCAGGCACCAGAAGATCTGCGTGCAACAGCGTATCATGAAGCTGGACATGCTCTTCTCCGTCTTTTGCAGCCAGAACATACACAGCCATTGCATAAAGTGACAATTGTCCCTCGTGGACGGGCACTTGGTTTTGCAGCACATCTTCCAGAGCGTGATAAATACTCACAAAGTAAACAAGAGCTGGAGGCTGAAATGGTCGTGATTCTTGGTGGTCGTGTTGGTGAAGAGATTGGTATGGGTAAGAAGTTTACCGGTGTTACCAATGACTTGCAGCGTGTGACTCATATGGCACGTAGCATGGTCTGTGACTACGGAATGTCTGATTCATTGGGGCTTTTGTCTTACACTGAGATGCAAAAGAAATATTCTCCAGAGACAGCTGATAAAGTAGACCAAGAGATCAGAGCAATTGTTGATGGTTGTTATAAGCGCGCTACTGATCTGATTGAAAAGAATCGTGGGATGCTCGATACATTGACTGAGAAGTTGCTTGAGAAAGAAACAATGCAAGCTGAAGAGATTTATGAGCTTCTTGGCATTAAGCCGCGTGTATTGCACAAATTGGTCTAA

Transcript

ANN32543-RA

Protein

Uniprot

Uniprot term	Description
A0L4S0	ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=ftsH PE=3 SV=1
A9EXK6	ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum (strain So ce56) OX=448385 GN=ftsH4 PE=3 SV=1
D1C1U7	ATP-dependent zinc metalloprotease FtsH 1 OS=Sphaerobacter thermophilus (strain ATCC 49802 / DSM 20745 / KCCM 41009 / NCIMB 13125 / S 6022) OX=479434 GN=ftsH1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF01434	Peptidase_M41	Peptidase family M41	Domain	Interproscan
PF06480	FtsH_ext	FtsH Extracellular	Family	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037219	Homologous_superfamily	Peptidase M41-like	Interproscan
IPR005936	Family	ATP-dependent zinc metalloprotease, FtsH	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR000642	Domain	Peptidase M41	Interproscan
IPR011546	Domain	Peptidase M41, FtsH extracellular	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23076	METALLOPROTEASE M41 FTSH	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0030163	Biological Process	protein catabolic process	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03798	ftsH, hflB; cell division protease FtsH	EC:3.4.24.-	Chaperones and folding catalysts	ko03110	deepkoala