Detailed information of ANN32545-RA in Montipora grisea

Genomic Location: Scaffold_1145__1_contigs__length_61047:43739...45827
NR annotation: HBL98856.1, lysine--tRNA ligase [Candidatus Dependentiae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3A9M2Lysine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=lysS PE=3 SV=1
Q9KGG4Lysine--tRNA ligase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lysS PE=3 SV=1
A1K5J9Lysine--tRNA ligase OS=Azoarcus sp. (strain BH72) OX=418699 GN=lysS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02777Sod_Fe_CIron/manganese superoxide dismutases, C-terminal domainDomainInterproscan
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF00081Sod_Fe_NIron/manganese superoxide dismutases, alpha-hairpin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036324Homologous_superfamilyManganese/iron superoxide dismutase, N-terminal domain superfamilyInterproscan
IPR019832DomainManganese/iron superoxide dismutase, C-terminalInterproscan
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR036314Homologous_superfamilyManganese/iron superoxide dismutase, C-terminal domain superfamilyInterproscan
IPR019831DomainManganese/iron superoxide dismutase, N-terminalInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR019833Binding_siteManganese/iron superoxide dismutase, binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004784Molecular Functionsuperoxide dismutase activityInterproscan
GO:0006801Biological Processsuperoxide metabolic processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04567KARS, lysS; lysyl-tRNA synthetase, class IIEC:6.1.1.6
Transfer RNA biogenesisko03016deepkoala

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