Detailed information of ANN32570-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:19095308...19114508
NR annotation: KAJ7386155.1, MAGUK p55 sub member 6 [Desmophyllum pertusum]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9NZW5Protein PALS2 OS=Homo sapiens OX=9606 GN=PALS2 PE=1 SV=2
Q9JLB0Protein PALS2 OS=Mus musculus OX=10090 GN=Pals2 PE=1 SV=1
D3ZAA9MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000787 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07653
all species →
SH3_2Variant SH3 domainDomainInterproscan
PF02828
all species →
L27L27 domainDomainInterproscan
PF00595
all species →
PDZPDZ domainDomainInterproscan
PF00625
all species →
Guanylate_kinGuanylate kinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →
DomainPDZ domainInterproscan
IPR050716
all species →
FamilyMembrane-associated guanylate kinaseInterproscan
IPR008145
all species →
DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR036892
all species →
Homologous_superfamilyL27 domain superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004172
all species →
DomainL27 domainInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR014775
all species →
DomainL27 domain, C-terminalInterproscan
IPR036034
all species →
Homologous_superfamilyPDZ superfamilyInterproscan
IPR008144
all species →
DomainGuanylate kinase-like domainInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR020590
all species →
Conserved_siteGuanylate kinase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23122
all species →
MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUKInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0005911
all species →
Cellular Componentcell-cell junctionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN32570-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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