Gene detail

Detailed information of ANN32634-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:20877611...20892992
NR annotation: CAH3119309.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN32634-RA

ATGCATTTCACTTTTATACACTGTACCAGGTTTCATTATGAATCATCTGCTGAGAGCTTAGGAGTCCCAAGAGATCACAGGATCATTAAAAAGCTGGCTCATGTTGGAAGACTTGATAGCTCTGACAGCCTTACATCAGACTTCTCTGATTGTAGCAGAACTTCCCATGACGTCATTTCACTGCTGAACGCAATGACCGTGGACCCGGAGGAGTTTCTTGCTGACCTGGGATTTGCTGAACCGGACATGCGCACTCGTATTCCTGATCGTTTTCTTGAGACACCGTCCAGTGCGCGTGGCATTGATGTCGAGTCGTTTCGGCGAAGCTTGGATCAGGATGATGTCTACGGTTCACCGTCTCAAGAGTCCCCAGTATGGTCGGACCCAGGCTCCAGCAGAATCCCGTTCAGGTTCATCGCATCTTGCACGGAACCAGTAAACCCGGTGCTTAGCGGAGGTTACAGCTCTGTACCCCTCATCTCCGAACCTGAAGAGGTCCCTGAGGATTCGTTTGACTTGATGAGGCACCTTAGGCTCAACAAGCCTTCTCACGTGACCAAGGGGATGTTTCTGGAACCAGTTACAGAAGAGCTTGAAGTTTCCTCTGTTGGGAGCGGGACGGTGCGGACAAAGATTTCTAGGAAGCTTTCTAACGAAGAAGGAACTATAGTAAGGGAGGATTCTTTGGAACAAGCAAACTTGGAATCTGAAGTGTTACTGTGTGTACCAGTTATAGAAATCGGAGACAAGGGCTTGGAATCGATTGAGTTCATAAAAACAAAAGTTGCCGAGAAAGCTAAAGATGAATCATTGATTGTTGTAACTGTAGAAGATGAAGAAGAAGCGGATTTGTCTCGTGTTCAAGATGCTGCGACAAGTAACTCAGAGAAATCATCTGAGAGTGACGCAGTGAATTTCAATGATTGTAATACAGAAATACACCAAGGCGAGACGAGTGCTAGTGATTCGAACAAAAACTATGCATCGGTAGACTTTGGAAGTGAACAAATCGAAGACACGATGGGCATTTCACCTTGTTTGCCGATCCCAGCGCACTTGAAAGTGGCAAGTGTTGTTGTTCAAGATTCGTTTGAACTCGAGGAAATCACGAACGAAGACTTCAACGAGAAAGAATCATCGTCCTCCACGGATCCAGAAGCCGGATTAAATGTCGAGTCATCAGACAAGCGTTTAACGAGAGAAAACAGCGGAGAAAGCAGCGGGTTTGAGGAAATGCCCCCAGATAAAGACACGCTCAGTCCAGGCTCTTCTTCGCCAACGTTAGGCTTGAAGCGTTTCTCCGCAGACGCGCATGTCATAGTGAGTGATAGCCGCAGACCTTTGGCGGCACTTCTAGACCCGGAAATGCTCAGCTTGGCCGTAGAAAAGGCCCGAAAGGGAGGGGTGTGTGCGGACGACAAATCTCCGCGTGCTACCTTCGCGCAGAGAAGAACGAGATCGTTAACTAAGCAGCGTCCAGTTGATGAGGACTTTTTGGCTTCTTTTGTGTTTACTCCAAATTCACCCGTGCTGAGAGATTCTGTACATCAAGACAAAAGTCTGGGCAAGAAAGTAACACACGATGTTTCCTCCGAAGATTTAGCGCTAAGTTTTAACGCTACATCTAAAAACCTGAAATCAAATATTGATTGTTCGAAGGCTAGTCCTGATTACGTTAGTGCGACGGACGAGAACTACAACACAGTGGTTAAATCTGAACCTGATAAACCTGCACTAGAGGAAAATCAAAACAATATAGAAGAAATGGGTTTGTTGCCTGGTGGAAGTGTTGAAGATGAACTGCAAAGCAATGGAGAAGCGTTGAATCTCAAGGAGGCTGAAACCGCTGTGAATTCTCAAGCTGAATTTAGCTTTAACGAAATAGTAATTAGAAGCGAAGGAGACTTGCCACCATTAACGCCAGTAACAGATGATAATATTTCAGAGCAACATGACGATTATAACAAAGATTGTGAACACAAAAAGAGGGACGATTCTTTCCTTACCCTTGGAGGTGAACATGACTTGTCTCGGCCTGAACCTTGCGTACAATTTGGAGAGGAAACTGAAAACTCACGTGATCTTGTCGCTGGTGAGAACGGATTGGTTTCATCTGTTCCAGAGGAACTGACAGAGTCATCTGGGGCATGCGCACAAGTGGAACAGAGGGAAGGATCTCAAAAGCCACTGCAAAAGGTTGATTCTGATTATCAGCAGCATTATCTTCACGAAATAAACGTTCTTGAGCAAAGCATTCAAAAGTACGAATCATGTCTCTCTTCTGGCGGATCGCTGGATGTACTCGGACCATCATATTGCACTAAGCAAATGCTTGCACGCATAACCGAGGAAATGAAAGCCATTCAAGAGCTTCGCTTGTTGATCAATTCTGAACTTGAAAGGATGAAAGACATGCTCGCTGAACGGCGTAACATGCTGCTAGCTGGAGCTACGAGAGATCCCGTTGGTTCCAGTGTATCTCAAAAGATGGCGGATCTTCTACGAGAGCAATCTTCGTTAAATATCGGGCTTTCGAACATCAGCGATGAATTATCGATTCGTAAGAAGGCATCCCGAAGGGCGAGGATATACTCGCACATTGAAAGCGCCAAGAGAGAGTTGAAAGAAGAAAGAGAAAAGTGTATGCGAGAGTTTCGTGAGGAGGTAAGATTTTATTCCGTTGATGGTGAAATTGTAGTGTCCTTAAGAAAGCTCGTACATGCGTGA

Transcript

ANN32634-RA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006319 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14722 all species →	KRAP_IP3R_bind	Ki-ras-induced actin-interacting protein-IP3R-interacting domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043444 all species →	Family	Protein TESPA1-like	Interproscan
IPR029325 all species →	Domain	ITPR-interacting domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17469 all species →	SPERM SPECIFIC ANTIGEN 2-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09040	NFE2L1_3; nuclear factor erythroid 2-related factor 1/3	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.