Genomic Location: Scaffold_1743__1_contigs__length_50390:4027...7131
NR annotation: MYI89173.1, choline dehydrogenase [Gammaproteobacteria bacterium]
| CDS | ||||
| ANN32757-RA | ||||
| Transcript |
| ANN32757-RA |
| Protein |
| ANN32757-RA |
| Uniprot term | Description |
|---|---|
| B2JS89 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1 |
| B2TCJ8 | Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) OX=398527 GN=betA PE=3 SV=1 |
| A0B2F7 | Oxygen-dependent choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) OX=331272 GN=betA PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00732 | GMC_oxred_N | GMC oxidoreductase | Domain | Interproscan |
| PF05199 | GMC_oxred_C | GMC oxidoreductase | Domain | Interproscan |
| PF01425 | Amidase | Amidase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000172 | Domain | Glucose-methanol-choline oxidoreductase, N-terminal | Interproscan |
| IPR036188 | Homologous_superfamily | FAD/NAD(P)-binding domain superfamily | Interproscan |
| IPR012132 | Family | Glucose-methanol-choline oxidoreductase | Interproscan |
| IPR011533 | Family | Oxygen-dependent choline dehydrogenase | Interproscan |
| IPR007867 | Domain | Glucose-methanol-choline oxidoreductase, C-terminal | Interproscan |
| IPR023631 | Domain | Amidase signature domain | Interproscan |
| IPR036928 | Homologous_superfamily | Amidase signature (AS) superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11552 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016614 | Molecular Function | oxidoreductase activity, acting on CH-OH group of donors | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0008812 | Molecular Function | choline dehydrogenase activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0019285 | Biological Process | glycine betaine biosynthetic process from choline | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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