Detailed information of ANN32849-RA in Leptoseris scabra

Genomic Location: Scaffold_11__1_contigs__length_41608735:26478755...26500124
NR annotation: CAH3128505.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y5A7NEDD8 ultimate buster 1 OS=Homo sapiens OX=9606 GN=NUB1 PE=1 SV=2
P54729NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008014 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Alpha-Helix|UBA · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18037
all species →
Ubiquitin_5Ubiquitin-like domainDomainInterproscan
PF00627
all species →
UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015940
all species →
DomainUbiquitin-associated domainInterproscan
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR010998
all species →
Homologous_superfamilyIntegrase/recombinase, N-terminalInterproscan
IPR000626
all species →
DomainUbiquitin-like domainInterproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR041207
all species →
DomainNEDD8 ultimate buster 1, ubiquitin-like domainInterproscan
IPR039749
all species →
FamilyNEDD8 ultimate buster 1Interproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12948
all species →
NEDD8 ULTIMATE BUSTER-1 BS4 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:2000058
all species →
Biological Processregulation of ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN32849-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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