Gene detail

Detailed information of ANN33075-RA in Montipora grisea

Genomic Location: Scaffold_819__1_contigs__length_72066:61822...62679
NR annotation: MXZ17043.1, hydroxymethylbilane synthase [Rhodothermaceae bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C0ZAH1	Porphobilinogen deaminase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=hemC PE=3 SV=1
Q1INI6	Porphobilinogen deaminase OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=hemC PE=3 SV=1
A4J6H7	Porphobilinogen deaminase OS=Desulforamulus reducens (strain ATCC BAA-1160 / DSM 100696 / MI-1) OX=349161 GN=hemC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004112 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01379 all species →	Porphobil_deam	Porphobilinogen deaminase, dipyromethane cofactor binding domain	Domain	Interproscan
PF03900 all species →	Porphobil_deamC	Porphobilinogen deaminase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036803 all species →	Homologous_superfamily	Porphobilinogen deaminase, C-terminal domain superfamily	Interproscan
IPR022417 all species →	Domain	Porphobilinogen deaminase, N-terminal	Interproscan
IPR000860 all species →	Family	Porphobilinogen deaminase	Interproscan
IPR022418 all species →	Domain	Porphobilinogen deaminase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11557 all species →	PORPHOBILINOGEN DEAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004418 all species →	Molecular Function	hydroxymethylbilane synthase activity	Interproscan
GO:0033014 all species →	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006783 all species →	Biological Process	heme biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01749	hemC, HMBS; hydroxymethylbilane synthase	EC:2.5.1.61	Porphyrin metabolism	ko00860	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.